RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Fam107bQ3TGF2 131 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Tspyl2Q7TQI8 677 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Dennd4bQ3U1Y4 1499 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ctnna3Q65CL1 895 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Fam114a1Q9D281 569 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 PcQ05920 1178 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ssrp1Q08943 708 aaKnown RBP6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Slc17a8Q8BFU8 601 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ythdc2B2RR83 1445 aaKnown RBP6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 AnkarA2RT91 1465 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Frmpd2A0A140LI67 1392 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ctnna2Q61301 953 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Znf18Q810A1 556 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Trappc8E9PWG2 1437 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 DlatQ8BMF4 642 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Cep135Q6P5D4 1140 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Sass6Q80UK7 654 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Fam43aQ8BUP8 424 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Edc4Q3UJB9 1406 aaKnown RBP6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Rpl13P47963 211 aaKnown RBP6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Lrrc9Q8CDN9 1456 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Kif2aP28740 705 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Acbd3Q8BMP6 525 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ube3aO08759 870 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ccdc129Q14B48 1034 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Eif3j1Q3UGC7 261 aaKnown RBP6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Eif3j2Q66JS6 263 aa6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Spats2Q8K1N4 545 aaKnown RBP6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Nsfl1cQ9CZ44 370 aaKnown RBP6.31□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Cadps2Q8BYR5 1297 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Arfgap2Q99K28 520 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Galnt17Q7TT15 598 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ccar2Q8VDP4 922 aaKnown RBP6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 RarsQ9D0I9 660 aaKnown RBP6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 PalldQ9ET54 1408 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Dapk3O54784 448 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Hdgfl1Q2VPR5 283 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Cep120Q7TSG1 988 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Hirip3Q8BLH7 601 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Rrbp1Q99PL5 1605 aaKnown RBP6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Slc27a3O88561 667 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 HellsQ60848 821 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Stk36Q69ZM6 1316 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 TnnQ80Z71 1560 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ctr9Q62018 1173 aaKnown RBP6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Luc7l2Q7TNC4 392 aaKnown RBP6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Slc14a2Q8R4T9 930 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Krt7Q9DCV7 457 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Prl3d2F6R3P9 224 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Trim30cD3YVI9 513 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Krt18P05784 423 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Atp2b3Q0VF55 1220 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Exoc8Q6PGF7 716 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 WizO88286 1684 aaKnown RBP6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Dync1i1O88485 628 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Snrpa1P57784 255 aaKnown RBP6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ifih1Q8R5F7 1025 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Rufy3Q9D394 469 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 A0A1W2P7S8 802 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Cdc5lQ6A068 802 aaKnown RBP6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Egfl6Q9JJZ5 550 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Rasa1E9PYG6 1038 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 SfswapQ3USH5 945 aaKnown RBP6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Znf771Q8BJ90 317 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Disp1Q3TDN0 1521 aa6.3□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Slx4Q6P1D7 1565 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Plxnc1Q9QZC2 1574 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Svs3aF2Z472 265 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ifit1bl2Q3U687 466 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 ThemisQ8BGW0 636 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Bcar3Q9QZK2 820 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Rbbp8nlA2ABX0 614 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 NppbP40753 121 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ppp2r5eQ61151 467 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Rsph6aQ8CDR2 708 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 MthfsQ9D110 203 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Homer1Q9Z2Y3 366 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Cyp2ab1S4R196 498 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Prim1P20664 417 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Nkx1-2P42580 305 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Tacc3Q9JJ11 631 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Hip1rQ9JKY5 1068 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Nucb1Q02819 459 aaKnown RBP6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Iffo1Q8BXL9 562 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Tmem143Q8VD26 458 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Thoc2B1AZI6 1594 aaKnown RBP6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ccdc114Q3UX62 658 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 RragbQ6NTA4 374 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Sdccag8Q80UF4 717 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Nek11Q8C0Q4 628 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Znf394Q9Z1D9 521 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Vamp4O70480 141 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Clip2Q9Z0H8 1047 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Fam186bD3Z420 943 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Pdia3P27773 505 aaKnown RBP6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Dzip1lQ499E4 774 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Micall1Q8BGT6 870 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Maip1Q8BHE8 291 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Gramd4Q8CB44 633 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Cfap73J3QPZ5 306 aa6.29□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 56.1 ms