RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Ccdc7Q9D541 371 aa13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 Mx2Q9WVP9 655 aa13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 Myl10Q62082 202 aa13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 Fsd2Q8BZ52 692 aa13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 Sirt1Q923E4 737 aa13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 Rbm33Q9CXK9 1231 aaKnown RBP13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 AceP09470 1312 aa13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 Gnat3Q3V3I2 354 aa13.43□□□□□ -0.26
Herc4-201ENSMUST00000020258 Prdm1Q60636 856 aa13.43□□□□□ -0.26
Herc4-201ENSMUST00000020258 Ddx54Q8K4L0 874 aaKnown RBP13.43□□□□□ -0.26
Herc4-201ENSMUST00000020258 Zhx1P70121 873 aa13.43□□□□□ -0.26
Herc4-201ENSMUST00000020258 Nxf7Q80SZ6 620 aaKnown RBP13.43□□□□□ -0.26
Herc4-201ENSMUST00000020258 Slu7Q8BHJ9 585 aa13.43□□□□□ -0.26
Herc4-201ENSMUST00000020258 Flad1Q8R123 492 aa13.43□□□□□ -0.26
Herc4-201ENSMUST00000020258 Igsf1Q7TQA1 1317 aa13.43□□□□□ -0.26
Herc4-201ENSMUST00000020258 Gemin5Q8BX17 1502 aaKnown RBP13.43□□□□□ -0.26
Herc4-201ENSMUST00000020258 Washc4Q3UMB9 1173 aa13.43□□□□□ -0.26
Herc4-201ENSMUST00000020258 Agtpbp1Q641K1 1218 aa13.43□□□□□ -0.26
Herc4-201ENSMUST00000020258 U2af1l4Q8BGJ9 220 aa13.43□□□□□ -0.26
Herc4-201ENSMUST00000020258 Kansl3A2RSY1 903 aaKnown RBP13.42□□□□□ -0.26
Herc4-201ENSMUST00000020258 Zscan29E9Q5B4 869 aa13.42□□□□□ -0.26
Herc4-201ENSMUST00000020258 Adcy9P51830 1353 aa13.42□□□□□ -0.26
Herc4-201ENSMUST00000020258 Ino80Q6ZPV2 1559 aa13.42□□□□□ -0.26
Herc4-201ENSMUST00000020258 Txnrd1Q9JMH6 613 aa13.42□□□□□ -0.26
Herc4-201ENSMUST00000020258 Mdc1Q5PSV9 1707 aa13.42□□□□□ -0.26
Herc4-201ENSMUST00000020258 Dnajc25A2ALW5 357 aa13.42□□□□□ -0.26
Herc4-201ENSMUST00000020258 Ctdnep1Q3TP92 244 aa13.42□□□□□ -0.26
Herc4-201ENSMUST00000020258 CltcQ68FD5 1675 aaKnown RBP13.42□□□□□ -0.26
Herc4-201ENSMUST00000020258 CrklP47941 303 aa13.42□□□□□ -0.26
Herc4-201ENSMUST00000020258 Grpel1Q99LP6 217 aa13.42□□□□□ -0.26
Herc4-201ENSMUST00000020258 Chd4Q6PDQ2 1915 aaKnown RBP13.42□□□□□ -0.26
Herc4-201ENSMUST00000020258 Zfp91Q62511 572 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Phf23Q8BSN5 401 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 DymQ8CHY3 669 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Plcd1Q8R3B1 756 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Pcdhb15Q91Y04 786 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Mrpl44Q9CY73 333 aaKnown RBP13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Oas2E9Q9A9 742 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Tnni2P13412 182 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Eif5P59325 429 aaKnown RBP13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Gm21985Q6P6P5 1106 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Asic4Q7TNS7 539 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Ppp1r10Q80W00 888 aaKnown RBP13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 4930572O03RikQ8C5Y0 211 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Hecw2Q6I6G8 1578 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 4930407I10RikD3Z5T8 1512 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Nucb2P81117 420 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Ccdc129Q14B48 1034 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Trim25Q61510 634 aaKnown RBP13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Znf653Q6YND2 615 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Slain2Q8CI08 581 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Col1a2Q01149 1372 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Abcc4E9Q236 1325 aa13.41□□□□□ -0.26
Herc4-201ENSMUST00000020258 Card6E9PWH2 1175 aa13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 Cers3Q1A3B0 383 aa13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 Phkg2Q9DB30 406 aa13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 Arhgef28P97433 1693 aa13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 Mtx1P47802 317 aa13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 Tmem87bQ8BKU8 555 aa13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 Nek11Q8C0Q4 628 aa13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 Luzp1Q8R4U7 1068 aaKnown RBP13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 SrrtQ99MR6 875 aaKnown RBP13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 Atg3Q9CPX6 314 aa13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 Frat1P70339 274 aa13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 Gabpb2P81069 414 aa13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 Cep55Q8BT07 462 aa13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 Eif3bQ8JZQ9 803 aaKnown RBP13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 ApobrQ8VBT6 942 aa13.4□□□□□ -0.26
Herc4-201ENSMUST00000020258 Trim56Q80VI1 734 aaKnown RBP13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 Zfp113Q8C689 439 aa13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 Ddx27Q921N6 760 aaKnown RBP13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 HdgfP51859 237 aaKnown RBP13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 Gsdma2Q32M21 443 aa13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 L1td1Q587J6 782 aaKnown RBP13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 Acnat2Q8BGG9 420 aa13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 Kif20bQ80WE4 1774 aaKnown RBP13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 Znf335A2A5K6 1337 aa13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 Ddx58Q6Q899 926 aa13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 Rbm19Q8R3C6 952 aaKnown RBP13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 Gnl2Q99LH1 728 aaKnown RBP13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 Cwc25Q9DBF7 416 aa13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 Mst1rQ62190 1378 aa13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 Rbm28Q8CGC6 750 aaKnown RBP13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 Ncoa5Q91W39 579 aaKnown RBP13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 IncenpQ9WU62 880 aa13.39□□□□□ -0.27
Herc4-201ENSMUST00000020258 NktrP30415 1453 aa13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 Mybbp1aQ7TPV4 1344 aaKnown RBP13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 Cdk12Q14AX6 1484 aaKnown RBP13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 Krt25Q8VCW2 446 aa13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 Add2Q9QYB8 725 aa13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 Ccdc112A0AUP1 442 aa13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 Sult6b1P0CC03 303 aa13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 Dnm1P39053 867 aa13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 Cplx2P84086 134 aa13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 Cfap157Q0VFX2 523 aa13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 Ankle2Q6P1H6 964 aa13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 LyarQ08288 388 aaKnown RBP13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 Usp28Q5I043 1051 aa13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 Ppp1r37Q8BKR5 712 aa13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 SdsQ8VBT2 327 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms