RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Oas2E9Q9A9 742 aa19.16■□□□□ 0.66
Trim28-201ENSMUST00000005705 Speer4bQ9D9F7 267 aa19.16■□□□□ 0.66
Trim28-201ENSMUST00000005705 Kdm6aO70546 1401 aa19.15■□□□□ 0.66
Trim28-201ENSMUST00000005705 Esyt1Q3U7R1 1092 aaKnown RBP19.15■□□□□ 0.66
Trim28-201ENSMUST00000005705 PsapQ61207 557 aaKnown RBP19.15■□□□□ 0.66
Trim28-201ENSMUST00000005705 Col1a2Q01149 1372 aa19.15■□□□□ 0.66
Trim28-201ENSMUST00000005705 Irgm2A0A140LIF8 407 aa19.15■□□□□ 0.66
Trim28-201ENSMUST00000005705 Ctdnep1Q3TP92 244 aa19.15■□□□□ 0.66
Trim28-201ENSMUST00000005705 RdxP26043 583 aaKnown RBP19.15■□□□□ 0.66
Trim28-201ENSMUST00000005705 Tyro3P55144 880 aa19.15■□□□□ 0.66
Trim28-201ENSMUST00000005705 Atp1a3Q6PIC6 1013 aa19.15■□□□□ 0.66
Trim28-201ENSMUST00000005705 Pdzd9Q9D9M4 266 aa19.15■□□□□ 0.66
Trim28-201ENSMUST00000005705 Anxa1P10107 346 aaKnown RBP19.14■□□□□ 0.66
Trim28-201ENSMUST00000005705 Tshz2Q68FE9 1030 aa19.14■□□□□ 0.66
Trim28-201ENSMUST00000005705 Arid5bQ8BM75 1188 aaKnown RBP19.14■□□□□ 0.66
Trim28-201ENSMUST00000005705 Aox2Q5SGK3 1345 aa19.14■□□□□ 0.65
Trim28-201ENSMUST00000005705 Rbbp8nlA2ABX0 614 aa19.14■□□□□ 0.65
Trim28-201ENSMUST00000005705 Nucb2P81117 420 aa19.14■□□□□ 0.65
Trim28-201ENSMUST00000005705 Ttc19Q8CC21 365 aa19.14■□□□□ 0.65
Trim28-201ENSMUST00000005705 Tmx1Q8VBT0 278 aa19.14■□□□□ 0.65
Trim28-201ENSMUST00000005705 Farp2Q91VS8 1065 aa19.14■□□□□ 0.65
Trim28-201ENSMUST00000005705 NaspQ99MD9 773 aaKnown RBP19.13■□□□□ 0.65
Trim28-201ENSMUST00000005705 PdcQ9QW08 244 aa19.13■□□□□ 0.65
Trim28-201ENSMUST00000005705 Bin1O08539 588 aaKnown RBP19.13■□□□□ 0.65
Trim28-201ENSMUST00000005705 Dis3l2Q8CI75 870 aaKnown RBP19.13■□□□□ 0.65
Trim28-201ENSMUST00000005705 Gm21663A0A0G2JE01 267 aa19.13■□□□□ 0.65
Trim28-201ENSMUST00000005705 Cspp1B2RX88 1205 aa19.13■□□□□ 0.65
Trim28-201ENSMUST00000005705 Gm7361D3Z6R1 267 aa19.13■□□□□ 0.65
Trim28-201ENSMUST00000005705 5031410I06RikE9Q4E0 267 aa19.13■□□□□ 0.65
Trim28-201ENSMUST00000005705 Gm1979E9QAN3 267 aa19.13■□□□□ 0.65
Trim28-201ENSMUST00000005705 Gm5862K7N5V5 267 aa19.13■□□□□ 0.65
Trim28-201ENSMUST00000005705 Gm10220K7N660 267 aa19.13■□□□□ 0.65
Trim28-201ENSMUST00000005705 CerkQ8K4Q7 531 aa19.13■□□□□ 0.65
Trim28-201ENSMUST00000005705 Prl7a2O54831 253 aa19.12■□□□□ 0.65
Trim28-201ENSMUST00000005705 DbnlQ62418 436 aa19.12■□□□□ 0.65
Trim28-201ENSMUST00000005705 Rbm17Q8JZX4 405 aaKnown RBP19.12■□□□□ 0.65
Trim28-201ENSMUST00000005705 OptnQ8K3K8 584 aa19.12■□□□□ 0.65
Trim28-201ENSMUST00000005705 Add3Q9QYB5 706 aaKnown RBP19.12■□□□□ 0.65
Trim28-201ENSMUST00000005705 Oxsr1Q6P9R2 527 aa19.12■□□□□ 0.65
Trim28-201ENSMUST00000005705 Lrrfip2Q91WK0 415 aa19.12■□□□□ 0.65
Trim28-201ENSMUST00000005705 Col14a1Q80X19 1797 aa19.11■□□□□ 0.65
Trim28-201ENSMUST00000005705 Irx4Q9QY61 515 aa19.11■□□□□ 0.65
Trim28-201ENSMUST00000005705 Nup153E9Q3G8 1462 aaKnown RBP19.11■□□□□ 0.65
Trim28-201ENSMUST00000005705 ZwintQ9CQU5 252 aa19.11■□□□□ 0.65
Trim28-201ENSMUST00000005705 Noc3lQ8VI84 807 aaKnown RBP19.1■□□□□ 0.65
Trim28-201ENSMUST00000005705 Igbp1bQ9QZ29 343 aa19.1■□□□□ 0.65
Trim28-201ENSMUST00000005705 Nfat5Q9WV30 1534 aa19.1■□□□□ 0.65
Trim28-201ENSMUST00000005705 Rnf123Q5XPI3 1314 aa19.1■□□□□ 0.65
Trim28-201ENSMUST00000005705 Spty2d1Q68FG3 682 aa19.1■□□□□ 0.65
Trim28-201ENSMUST00000005705 Sgsm2Q80U12 1005 aa19.1■□□□□ 0.65
Trim28-201ENSMUST00000005705 ThemisQ8BGW0 636 aa19.09■□□□□ 0.65
Trim28-201ENSMUST00000005705 Nlrp3Q8R4B8 1033 aa19.09■□□□□ 0.65
Trim28-201ENSMUST00000005705 IncenpQ9WU62 880 aa19.09■□□□□ 0.65
Trim28-201ENSMUST00000005705 Cdkn1cP49919 348 aa19.09■□□□□ 0.65
Trim28-201ENSMUST00000005705 Fsd1Q7TPM6 496 aa19.09■□□□□ 0.65
Trim28-201ENSMUST00000005705 Ccer1Q9CQL2 403 aa19.09■□□□□ 0.65
Trim28-201ENSMUST00000005705 Ccdc129Q14B48 1034 aa19.08■□□□□ 0.65
Trim28-201ENSMUST00000005705 Fkbp5Q64378 456 aa19.08■□□□□ 0.65
Trim28-201ENSMUST00000005705 Add2Q9QYB8 725 aa19.08■□□□□ 0.65
Trim28-201ENSMUST00000005705 Wdr33Q8K4P0 1330 aaKnown RBP19.08■□□□□ 0.65
Trim28-201ENSMUST00000005705 Gm21680A0A0G2JGR8 267 aa19.08■□□□□ 0.64
Trim28-201ENSMUST00000005705 Ano1Q8BHY3 960 aa19.08■□□□□ 0.64
Trim28-201ENSMUST00000005705 Nop14Q8R3N1 860 aaKnown RBP19.08■□□□□ 0.64
Trim28-201ENSMUST00000005705 TkfcQ8VC30 578 aa19.08■□□□□ 0.64
Trim28-201ENSMUST00000005705 Ankib1Q6ZPS6 1085 aa19.08■□□□□ 0.64
Trim28-201ENSMUST00000005705 Nxf7Q80SZ6 620 aaKnown RBP19.08■□□□□ 0.64
Trim28-201ENSMUST00000005705 Atg3Q9CPX6 314 aa19.08■□□□□ 0.64
Trim28-201ENSMUST00000005705 Rims2Q9EQZ7 1530 aa19.08■□□□□ 0.64
Trim28-201ENSMUST00000005705 Dlg5E9Q9R9 1921 aa19.07■□□□□ 0.64
Trim28-201ENSMUST00000005705 Pcdhb15Q91Y04 786 aa19.07■□□□□ 0.64
Trim28-201ENSMUST00000005705 TefQ9JLC6 301 aa19.07■□□□□ 0.64
Trim28-201ENSMUST00000005705 Col15a1O35206 1367 aa19.07■□□□□ 0.64
Trim28-201ENSMUST00000005705 Pdia6Q922R8 440 aaKnown RBP19.07■□□□□ 0.64
Trim28-201ENSMUST00000005705 Txnrd1Q9JMH6 613 aa19.07■□□□□ 0.64
Trim28-201ENSMUST00000005705 Nphp3Q7TNH6 1325 aa19.07■□□□□ 0.64
Trim28-201ENSMUST00000005705 TnrQ8BYI9 1358 aa19.07■□□□□ 0.64
Trim28-201ENSMUST00000005705 Leo1Q5XJE5 667 aa19.06■□□□□ 0.64
Trim28-201ENSMUST00000005705 Tbc1d30Q69ZT9 766 aa19.06■□□□□ 0.64
Trim28-201ENSMUST00000005705 Bcl11bQ99PV8 884 aa19.06■□□□□ 0.64
Trim28-201ENSMUST00000005705 CrklP47941 303 aa19.06■□□□□ 0.64
Trim28-201ENSMUST00000005705 FanccP50652 591 aa19.06■□□□□ 0.64
Trim28-201ENSMUST00000005705 Taf7Q9R1C0 341 aa19.06■□□□□ 0.64
Trim28-201ENSMUST00000005705 Abcc12Q80WJ6 1366 aa19.06■□□□□ 0.64
Trim28-201ENSMUST00000005705 Trim56Q80VI1 734 aaKnown RBP19.06■□□□□ 0.64
Trim28-201ENSMUST00000005705 Pms1Q8K119 917 aa19.06■□□□□ 0.64
Trim28-201ENSMUST00000005705 Dnajc2P54103 621 aaKnown RBP19.05■□□□□ 0.64
Trim28-201ENSMUST00000005705 Atf7Q8R0S1 413 aa19.05■□□□□ 0.64
Trim28-201ENSMUST00000005705 Mtx1P47802 317 aa19.05■□□□□ 0.64
Trim28-201ENSMUST00000005705 Rab3gap1Q80UJ7 981 aa19.05■□□□□ 0.64
Trim28-201ENSMUST00000005705 Adam1bQ8R534 806 aa19.05■□□□□ 0.64
Trim28-201ENSMUST00000005705 Syt10Q9R0N4 523 aa19.05■□□□□ 0.64
Trim28-201ENSMUST00000005705 Krt85Q9Z2T6 507 aa19.05■□□□□ 0.64
Trim28-201ENSMUST00000005705 Topaz1E5FYH1 1653 aa19.05■□□□□ 0.64
Trim28-201ENSMUST00000005705 Cfap157Q0VFX2 523 aa19.04■□□□□ 0.64
Trim28-201ENSMUST00000005705 Rnf20Q5DTM8 973 aa19.04■□□□□ 0.64
Trim28-201ENSMUST00000005705 Atf3Q60765 181 aa19.04■□□□□ 0.64
Trim28-201ENSMUST00000005705 Ccdc158Q8CDI6 1109 aa19.04■□□□□ 0.64
Trim28-201ENSMUST00000005705 Ccdc162pQ0VG85 912 aa19.04■□□□□ 0.64
Trim28-201ENSMUST00000005705 Lins1Q3U1D0 764 aa19.04■□□□□ 0.64
Trim28-201ENSMUST00000005705 Bloc1s2Q9CWG9 143 aa19.04■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms