RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CST1P01037 141 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 LDLRP01130 860 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 MT-ND1P03886 318 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 GKN3PP0CG01 181 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 PRG2P13727 222 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 POU3F2P20265 443 aaPredicted RBP6.05□□□□□ -1.44
UPF3B-205ENST00000636792 FPR1P21462 350 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 DNAJA1P31689 397 aaKnown RBP6.05□□□□□ -1.44
UPF3B-205ENST00000636792 RYKP34925 604 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 IDUAP35475 653 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 MSX2P35548 267 aaPredicted RBP6.05□□□□□ -1.44
UPF3B-205ENST00000636792 OR1E2P47887 323 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 LIMS1P48059 325 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 SLC9A3P48764 834 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 CTBP2P56545 445 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 SPIBQ01892 262 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 LY6DQ14210 128 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 TOMM20Q15388 145 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 INPP5JQ15735 1006 aaPredicted RBP6.05□□□□□ -1.44
UPF3B-205ENST00000636792 ATP6AP1Q15904 470 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 ZNF239Q16600 458 aaKnown RBP6.05□□□□□ -1.44
UPF3B-205ENST00000636792 NDUFAF6Q330K2 333 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 WLSQ5T9L3 541 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 EEF1A1P5Q5VTE0 462 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 ANKRD34AQ69YU3 496 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 OR5M10Q6IEU7 315 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 RPL13AP3Q6NVV1 102 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 ARSKQ6UWY0 536 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 RRM2BQ7LG56 351 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 GDF7Q7Z4P5 450 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 COMTD1Q86VU5 262 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 LACC1Q8IV20 430 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 CDK20Q8IZL9 346 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 CADM2Q8N3J6 435 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 SCAIQ8N9R8 606 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 OR4D11Q8NGI4 311 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 MFSD8Q8NHS3 518 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 POC1BQ8TC44 478 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 ZPLD1Q8TCW7 415 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 ABTB1Q969K4 478 aaPredicted RBP6.05□□□□□ -1.44
UPF3B-205ENST00000636792 MIB2Q96AX9 1013 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 SDCCAG3Q96C92 435 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 SNRNP40Q96DI7 357 aaKnown RBP6.05□□□□□ -1.44
UPF3B-205ENST00000636792 KLHL15Q96M94 604 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 SEPHS2Q99611 448 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 CHID1Q9BWS9 393 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 DCLRE1BQ9H816 532 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 FKRPQ9H9S5 495 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 NMNAT1Q9HAN9 279 aaPredicted RBP6.05□□□□□ -1.44
UPF3B-205ENST00000636792 FANCFQ9NPI8 374 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 CTPS2Q9NRF8 586 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 C6orf203Q9P0P8 240 aaPredicted RBP6.05□□□□□ -1.44
UPF3B-205ENST00000636792 ZNF835Q9Y2P0 537 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 TMED7Q9Y3B3 224 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 MED31Q9Y3C7 131 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 ZNF175Q9Y473 711 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 LYVE1Q9Y5Y7 322 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 CFAP47Q6ZTR5 3102 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 TRAV36DV7A0A075B6V5 113 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 POM121CA8CG34 1229 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 B8ZZF3 427 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 TNFRSF11BO00300 401 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 GNGT2O14610 69 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 FFAR1O14842 300 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 CLOCKO15516 846 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 SEMA7AO75326 666 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 TRAPPC6AO75865 159 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 ADAP00813 363 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 CRHP06850 196 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 ANXA8P13928 327 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 JUNBP17275 347 aaPredicted RBP6.04□□□□□ -1.44
UPF3B-205ENST00000636792 BMP7P18075 431 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 GSTM3P21266 225 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 GTF2E2P29084 291 aaKnown RBP6.04□□□□□ -1.44
UPF3B-205ENST00000636792 RRM2P31350 389 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 PTGS2P35354 604 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 LHX2P50458 406 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 CASP6P55212 293 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 CDH12P55289 794 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 CLDN18P56856 261 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 NUP107P57740 925 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 RAC3P60763 192 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 PMP22Q01453 160 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 NFATC3Q12968 1075 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 PIN1Q13526 163 aaPredicted RBP6.04□□□□□ -1.44
UPF3B-205ENST00000636792 RIPK1Q13546 671 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 PDK3Q15120 406 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 POU4F3Q15319 338 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 TOMM34Q15785 309 aaPredicted RBP6.04□□□□□ -1.44
UPF3B-205ENST00000636792 FGD3Q5JSP0 725 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 WIPI1Q5MNZ9 446 aaPredicted RBP6.04□□□□□ -1.44
UPF3B-205ENST00000636792 DCST1Q5T197 706 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 GTF2IRD2BQ6EKJ0 949 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 MTFR2Q6P444 385 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 SHQ1Q6PI26 577 aaKnown RBP6.04□□□□□ -1.44
UPF3B-205ENST00000636792 PAQR6Q6TCH4 344 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 TMPPEQ6ZT21 453 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 MBOAT2Q6ZWT7 520 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 MAMDC2Q7Z304 686 aaPredicted RBP6.04□□□□□ -1.44
UPF3B-205ENST00000636792 HDDC2Q7Z4H3 204 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms