RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 MPEG1Q2M385 716 aa12.22□□□□□ -0.45
USP6NL-205ENST00000609104 IDO2Q6ZQW0 420 aa12.22□□□□□ -0.45
USP6NL-205ENST00000609104 UHRF2Q96PU4 802 aa12.22□□□□□ -0.45
USP6NL-205ENST00000609104 MCOLN1Q9GZU1 580 aa12.22□□□□□ -0.45
USP6NL-205ENST00000609104 PATZ1Q9HBE1 687 aaKnown RBP12.22□□□□□ -0.45
USP6NL-205ENST00000609104 INPP5EQ9NRR6 644 aa12.22□□□□□ -0.45
USP6NL-205ENST00000609104 PCDHGA5Q9Y5G8 931 aa12.22□□□□□ -0.45
USP6NL-205ENST00000609104 HOXA1P49639 335 aaPredicted RBP12.21□□□□□ -0.45
USP6NL-205ENST00000609104 HBA1P69905 142 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 ZNF836Q6ZNA1 936 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 CLMPQ9H6B4 373 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 IL2RGP31785 369 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 HSD11B1LQ7Z5J1 315 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 SIAH1Q8IUQ4 282 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 KDM8Q8N371 416 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 OR5H6Q8NGV6 325 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 LINC01599Q8WXQ3 324 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 LMF2Q9BU23 707 aaKnown RBP12.21□□□□□ -0.45
USP6NL-205ENST00000609104 ZNF286AQ9HBT8 521 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 FAM212BQ9NTI7 297 aaPredicted RBP12.21□□□□□ -0.45
USP6NL-205ENST00000609104 IL1AP01583 271 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 NME2P22392 152 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 RAP2BP61225 183 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 PDZD3Q86UT5 571 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 FAM109AQ8N4B1 249 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 C8orf33Q9H7E9 229 aaPredicted RBP12.21□□□□□ -0.45
USP6NL-205ENST00000609104 NSA2O95478 260 aaKnown RBP12.21□□□□□ -0.45
USP6NL-205ENST00000609104 CLDN12P56749 244 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 DUSP19Q8WTR2 217 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 TRBV4-1A0A0J9YWV2 114 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 TCRBV3S1A0A5B6 114 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 SLC9B1P1A6NJY1 282 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 GDF1P27539 372 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 RBMS2Q15434 407 aaKnown RBP12.21□□□□□ -0.45
USP6NL-205ENST00000609104 MRPL2Q5T653 305 aaKnown RBP12.21□□□□□ -0.45
USP6NL-205ENST00000609104 HACD4Q5VWC8 232 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 WBP2NLQ6ICG8 309 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 FAM160A2Q8N612 972 aaPredicted RBP12.21□□□□□ -0.45
USP6NL-205ENST00000609104 OR56B4Q8NH76 319 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 ARPC5LQ9BPX5 153 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 SGPP1Q9BX95 441 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 TRAPPC2LQ9UL33 140 aa12.21□□□□□ -0.45
USP6NL-205ENST00000609104 CTDSP2O14595 271 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 MMP2P08253 660 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 IVDP26440 423 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 SMN1Q16637 294 aaKnown RBP12.21□□□□□ -0.46
USP6NL-205ENST00000609104 SLC6A19Q695T7 634 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.21□□□□□ -0.464e-9■■■■■ 74.4
USP6NL-205ENST00000609104 CMIPQ8IY22 773 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 METTL4Q8N3J2 472 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 PCDHB10Q9UN67 800 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 GJB3O75712 270 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 PMP2P02689 132 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 ARSAP15289 507 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 MTCP1P56278 107 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 GPR26Q8NDV2 337 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 OR13C2Q8NGS9 318 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 MUL1Q969V5 352 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 ANKRD9Q96BM1 317 aaPredicted RBP12.21□□□□□ -0.46
USP6NL-205ENST00000609104 METTL15A6NJ78 407 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 ZNF593O00488 134 aaPredicted RBP12.21□□□□□ -0.46
USP6NL-205ENST00000609104 ZNF217O75362 1048 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 IGHG1P01857 330 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 SNRPBP14678 240 aaKnown RBP12.21□□□□□ -0.46
USP6NL-205ENST00000609104 THBS3P49746 956 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 NTHL1P78549 312 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 EEF1A2Q05639 463 aaKnown RBP12.21□□□□□ -0.46
USP6NL-205ENST00000609104 BAXQ07812 192 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 TMEM41BQ5BJD5 291 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 AADACL3Q5VUY0 350 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 TMEM71Q6P5X7 295 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 C15orf39Q6ZRI6 1047 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 CLEC1AQ8NC01 280 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 CASD1Q96PB1 797 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 PM20D1Q6GTS8 502 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 ZNF852Q6ZMS4 543 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 NTMT1Q9BV86 223 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 SEMA4GQ9NTN9 838 aa12.21□□□□□ -0.46
USP6NL-205ENST00000609104 RAB27BO00194 218 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 OR2T1O43869 369 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 ZNF75AQ96N20 296 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 C1orf198Q9H425 327 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 HRASLSQ9HDD0 168 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 SMAD6O43541 496 aaKnown RBP12.2□□□□□ -0.46
USP6NL-205ENST00000609104 FCGR2AP12318 317 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 MFGE8Q08431 387 aaPredicted RBP12.2□□□□□ -0.46
USP6NL-205ENST00000609104 EMC10Q5UCC4 262 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 PIANPQ8IYJ0 282 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 OR11A1Q9GZK7 315 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 BCKDHBP21953 392 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 CCR7P32248 378 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 TLE4Q04727 773 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 OPCMLQ14982 345 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 SLC30A7Q8NEW0 376 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 LILRB4Q8NHJ6 448 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 TPPP3Q9BW30 176 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 SLAMF8Q9P0V8 285 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 PRSS21Q9Y6M0 314 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 MSMO1Q15800 293 aa12.2□□□□□ -0.46
USP6NL-205ENST00000609104 FZD9O00144 591 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms