RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 GABRB1P18505 474 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 FXYD6P3P58550 94 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 PRPS1P60891 318 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 FAM69AQ5T7M9 428 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 TCEANCQ8N8B7 351 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 IL4I1Q96RQ9 567 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 MRPS26Q9BYN8 205 aaKnown RBP16.29■□□□□ 0.2
VRK3-225ENST00000601912 NDEL1Q9GZM8 345 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 MCCC2Q9HCC0 563 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 PLA2G3Q9NZ20 509 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 ZNF229Q9UJW7 825 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 DKKL1Q9UK85 242 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 MSRB2Q9Y3D2 182 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 A0A087WXM4 84 aa16.28■□□□□ 0.2
VRK3-225ENST00000601912 ZC3H12DA2A288 527 aaKnown RBP16.28■□□□□ 0.2
VRK3-225ENST00000601912 TRIM64A6NGJ6 449 aa16.28■□□□□ 0.2
VRK3-225ENST00000601912 M0R129 80 aa16.28■□□□□ 0.2
VRK3-225ENST00000601912 WISP1O95388 367 aa16.28■□□□□ 0.2
VRK3-225ENST00000601912 HK1P19367 917 aa16.28■□□□□ 0.2
VRK3-225ENST00000601912 FKBP2P26885 142 aaKnown RBP16.28■□□□□ 0.2
VRK3-225ENST00000601912 CCL11P51671 97 aa16.28■□□□□ 0.2
VRK3-225ENST00000601912 GABARAPL2P60520 117 aa16.28■□□□□ 0.2
VRK3-225ENST00000601912 MFAP5Q13361 173 aa16.28■□□□□ 0.2
VRK3-225ENST00000601912 MAMDC2Q7Z304 686 aaPredicted RBP16.28■□□□□ 0.2
VRK3-225ENST00000601912 CCDC103Q8IW40 242 aa16.28■□□□□ 0.2
VRK3-225ENST00000601912 OR4Q3Q8NH05 313 aa16.28■□□□□ 0.2
VRK3-225ENST00000601912 MOGAT1Q96PD6 335 aa16.28■□□□□ 0.2
VRK3-225ENST00000601912 SIGLEC12Q96PQ1 595 aa16.28■□□□□ 0.2
VRK3-225ENST00000601912 BOKQ9UMX3 212 aaPredicted RBP16.28■□□□□ 0.2
VRK3-225ENST00000601912 WASF3Q9UPY6 502 aa16.28■□□□□ 0.2
VRK3-225ENST00000601912 SH3D21A4FU49 640 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 OR5H15A6NDH6 313 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 TLX2O43763 284 aaPredicted RBP16.27■□□□□ 0.2
VRK3-225ENST00000601912 FAM20BO75063 409 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 ASAH2BP0C7U1 165 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 GRK5P34947 590 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 FHL1Q13642 323 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 DEFB109BQ30KR1 87 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 THSD4Q6ZMP0 1018 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 LNX2Q8N448 690 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 FAM26EQ8N5C1 309 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 OR6S1Q8NH40 331 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 POC1BQ8TC44 478 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 NPAS1Q99742 590 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 FAM173AQ9BQD7 235 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 OR11A1Q9GZK7 315 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 RNF32Q9H0A6 362 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 TUBA8Q9NY65 449 aaPredicted RBP16.27■□□□□ 0.2
VRK3-225ENST00000601912 CPAMD8Q8IZJ3 1885 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 MPDZO75970 2070 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 CNTRLQ7Z7A1 2325 aa16.27■□□□□ 0.2
VRK3-225ENST00000601912 A0A0G2JMM0 328 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 A0A1W2PPB8 328 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 A0A1W2PRS3 328 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 KIR3DP1A8MWS1 328 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 SHISA8B8ZZ34 492 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 PTGES3LE9PB15 166 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 BLOC1S5-TXNDC5H3BN57 136 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 BHLHE40O14503 412 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 XPNPEP2O43895 674 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 PRKYO43930 277 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 CLPTM1O96005 669 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 BGLAPP02818 100 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 SMIM18P0DKX4 95 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 TFPIP10646 304 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 ATP6V1B1P15313 513 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 TCEA1P23193 301 aaKnown RBP16.27■□□□□ 0.19
VRK3-225ENST00000601912 RPL4P36578 427 aaKnown RBP16.27■□□□□ 0.19
VRK3-225ENST00000601912 GPR85P60893 370 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 RPS4XP62701 263 aaKnown RBP16.27■□□□□ 0.19
VRK3-225ENST00000601912 LTBQ06643 244 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 MFSD13AQ14CX5 517 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 SMN1Q16637 294 aaKnown RBP16.27■□□□□ 0.19
VRK3-225ENST00000601912 C1QL3Q5VWW1 255 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 MEDAGQ5VYS4 303 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 C3orf33Q6P1S2 294 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 NANOGNBQ7Z5D8 188 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 GTPBP8Q8N3Z3 284 aaPredicted RBP16.27■□□□□ 0.19
VRK3-225ENST00000601912 ATP6V1C2Q8NEY4 427 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 TMEM163Q8TC26 289 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 SLC25A43Q8WUT9 341 aaPredicted RBP16.27■□□□□ 0.19
VRK3-225ENST00000601912 SLC25A36Q96CQ1 311 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 PTDSS2Q9BVG9 487 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 POTEKPQ9BYX7 375 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 ENKD1Q9H0I2 346 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 ZNF552Q9H707 407 aaPredicted RBP16.27■□□□□ 0.19
VRK3-225ENST00000601912 ZFP64Q9NPA5 681 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 BATF3Q9NR55 127 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 DEPPQ9NTK1 212 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 PLCXD1Q9NUJ7 323 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 HIF3AQ9Y2N7 669 aa16.27■□□□□ 0.19
VRK3-225ENST00000601912 SURF4O15260 269 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 TLX3O43711 291 aaPredicted RBP16.26■□□□□ 0.19
VRK3-225ENST00000601912 NOS3P29474 1203 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 SRD5A2P31213 254 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 CDH15P55291 814 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 TUBA4AP68366 448 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 ARG2P78540 354 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 EFNB1P98172 346 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 SELENBP1Q13228 472 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms