RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 PRSS50Q9UI38 385 aa11.64□□□□□ -0.55
ERBB2-220ENST00000584684 LEF1Q9UJU2 399 aaPredicted RBP11.64□□□□□ -0.55
ERBB2-220ENST00000584684 SLC9A8Q9Y2E8 581 aa11.64□□□□□ -0.55
ERBB2-220ENST00000584684 NOSIPQ9Y314 301 aaKnown RBP11.64□□□□□ -0.55
ERBB2-220ENST00000584684 NSD1Q96L73 2696 aaPredicted RBP11.63□□□□□ -0.55
ERBB2-220ENST00000584684 A8MVM7 634 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 EVPLLA8MZ36 301 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 FRS3O43559 492 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 RAMP1O60894 148 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 GPIP06744 558 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 NCF2P19878 526 aaPredicted RBP11.63□□□□□ -0.55
ERBB2-220ENST00000584684 HOXC12P31275 282 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 OR2B6P58173 313 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 CDK6Q00534 326 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 SLC17A1Q14916 467 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 ADRM1Q16186 407 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 FBXW9Q5XUX1 488 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 ADAM5Q6NVV9 412 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 ZNF704Q6ZNC4 412 aaPredicted RBP11.63□□□□□ -0.55
ERBB2-220ENST00000584684 ATG4DQ86TL0 474 aaPredicted RBP11.63□□□□□ -0.55
ERBB2-220ENST00000584684 WFDC8Q8IUA0 241 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 KRTAP1-3Q8IUG1 177 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 CADM2Q8N3J6 435 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 LSMEM1Q8N8F7 131 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 NFKBIDQ8NI38 313 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 TMEM45BQ96B21 275 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 PLPPR2Q96GM1 343 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 NAA11Q9BSU3 229 aaPredicted RBP11.63□□□□□ -0.55
ERBB2-220ENST00000584684 SPATA5L1Q9BVQ7 753 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 SF3B5Q9BWJ5 86 aaKnown RBP11.63□□□□□ -0.55
ERBB2-220ENST00000584684 UBTD1Q9HAC8 227 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 C12orf10Q9HB07 376 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 DLL4Q9NR61 685 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.63□□□□□ -0.55
ERBB2-220ENST00000584684 DCTN4Q9UJW0 460 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 FLVCR1Q9Y5Y0 555 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 DSCAMO60469 2012 aa11.63□□□□□ -0.55
ERBB2-220ENST00000584684 CADP27708 2225 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 PLCE1Q9P212 2302 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 PRORSD1PA6NEY8 169 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 AQP7P3A6NL99 342 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 ANGPT2O15123 496 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 CD99P14209 185 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 CCNA2P20248 432 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 IGHV1-2P23083 117 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 RIPPLY3P57055 190 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 ADAM8P78325 824 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 SCARB2Q14108 478 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 TIMM23BQ5SRD1 257 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 C1QTNF12Q5T7M4 302 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 C5orf46Q6UWT4 87 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 DHDDSQ86SQ9 333 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 CCDC103Q8IW40 242 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 ZNF433Q8N7K0 673 aaPredicted RBP11.62□□□□□ -0.55
ERBB2-220ENST00000584684 BHLHE22Q8NFJ8 381 aaPredicted RBP11.62□□□□□ -0.55
ERBB2-220ENST00000584684 STK35Q8TDR2 534 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 CCL19Q99731 98 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 RSPO3Q9BXY4 272 aaPredicted RBP11.62□□□□□ -0.55
ERBB2-220ENST00000584684 ESRP2Q9H6T0 727 aaKnown RBP11.62□□□□□ -0.55
ERBB2-220ENST00000584684 EVA1AQ9H8M9 152 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 PARPBPQ9NWS1 579 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 ZNF446Q9NWS9 450 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 NDUFAF1Q9Y375 327 aa11.62□□□□□ -0.55
ERBB2-220ENST00000584684 NIPBLQ6KC79 2804 aaeCLIP11.61□□□□□ -0.55
ERBB2-220ENST00000584684 A0A0G2JND7 137 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 OR5H1A6NKK0 313 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 PDLIM1O00151 329 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 HS3ST1O14792 307 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 MRPL33O75394 65 aaKnown RBP11.61□□□□□ -0.55
ERBB2-220ENST00000584684 LYZL6O75951 148 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 VAMP5O95183 116 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 FOSL1P15407 271 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 PAX1P15863 534 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 GGT1P19440 569 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 SLC6A2P23975 617 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 ADSLP30566 484 aaPredicted RBP11.61□□□□□ -0.55
ERBB2-220ENST00000584684 NTF4P34130 210 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 PCBP3P57721 371 aaKnown RBP11.61□□□□□ -0.55
ERBB2-220ENST00000584684 RBBP4Q09028 425 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 FOXD4Q12950 439 aaPredicted RBP11.61□□□□□ -0.55
ERBB2-220ENST00000584684 TSC22D1Q15714 1073 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 RUNDC3AQ59EK9 446 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 NCMAPQ5T1S8 102 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 OTUD3Q5T2D3 398 aaPredicted RBP11.61□□□□□ -0.55
ERBB2-220ENST00000584684 C1orf140Q5VVS0 124 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 SHEQ5VZ18 495 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 NET1Q7Z628 596 aaPredicted RBP11.61□□□□□ -0.55
ERBB2-220ENST00000584684 RETREG3Q86VR2 466 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 COMTD1Q86VU5 262 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 ZNF611Q8N823 705 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 HIPK4Q8NE63 616 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 OR9K2Q8NGE7 335 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 ZNF775Q96BV0 537 aaPredicted RBP11.61□□□□□ -0.55
ERBB2-220ENST00000584684 DNAJA3Q96EY1 480 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 THOC1Q96FV9 657 aaKnown RBP11.61□□□□□ -0.55
ERBB2-220ENST00000584684 ANKRD27Q96NW4 1050 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 ZNF607Q96SK3 696 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 CGREF1Q99674 301 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 AMBRA1Q9C0C7 1298 aa11.61□□□□□ -0.55
ERBB2-220ENST00000584684 ASB6Q9NWX5 421 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms