RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 MNTQ99583 582 aa10.15□□□□□ -0.78
SKA2-204ENST00000578519 SPSB2Q99619 263 aa10.15□□□□□ -0.78
SKA2-204ENST00000578519 ULBP3Q9BZM4 244 aa10.15□□□□□ -0.78
SKA2-204ENST00000578519 NRSN2Q9GZP1 204 aa10.15□□□□□ -0.78
SKA2-204ENST00000578519 NUAK2Q9H093 628 aa10.15□□□□□ -0.78
SKA2-204ENST00000578519 NRIP3Q9NQ35 241 aa10.15□□□□□ -0.78
SKA2-204ENST00000578519 TRIM36Q9NQ86 728 aa10.15□□□□□ -0.78
SKA2-204ENST00000578519 BABAM2Q9NXR7 383 aa10.15□□□□□ -0.78
SKA2-204ENST00000578519 GRHPRQ9UBQ7 328 aa10.15□□□□□ -0.78
SKA2-204ENST00000578519 CHRNA9Q9UGM1 479 aa10.15□□□□□ -0.78
SKA2-204ENST00000578519 IL20RAQ9UHF4 553 aa10.15□□□□□ -0.78
SKA2-204ENST00000578519 TNRC6BQ9UPQ9 1833 aaKnown RBP10.14□□□□□ -0.79
SKA2-204ENST00000578519 TP53BP1Q12888 1972 aaPredicted RBP10.14□□□□□ -0.79
SKA2-204ENST00000578519 A0A075B6Q4 140 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 TMED7-TICAM2A0A0A6YYA0 188 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 C12orf71A8MTZ7 269 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 ZNF670-ZNF695F2Z2N8 137 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 BLOC1S5-TXNDC5H3BN57 136 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 ADAM11O75078 769 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 TIAF1O95411 115 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 SLC2A10O95528 541 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 NTN1O95631 604 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 TXNDC12O95881 172 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 SERPINA3P01011 423 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 IL1AP01583 271 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 SBK2P0C263 348 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 GAAP10253 952 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 F8A1P23610 371 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 GTF2E2P29084 291 aaKnown RBP10.14□□□□□ -0.79
SKA2-204ENST00000578519 BMXP51813 675 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 SLC25A1P53007 311 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 GAS1P54826 345 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 FXYD6P3P58550 94 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 CTXN1P60606 82 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 ZNF45Q02386 682 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 MRPL28Q13084 256 aaKnown RBP10.14□□□□□ -0.79
SKA2-204ENST00000578519 SNTA1Q13424 505 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 CRMP1Q14194 572 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 QPRTQ15274 297 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.14□□□□□ -0.79
SKA2-204ENST00000578519 FAM69AQ5T7M9 428 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 TMEM164Q5U3C3 297 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 ZNF322Q6U7Q0 402 aaPredicted RBP10.14□□□□□ -0.79
SKA2-204ENST00000578519 CBLN3Q6UW01 205 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 PAMR1Q6UXH9 720 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 APOOLQ6UXV4 268 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 KCTD20Q7Z5Y7 419 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 LHFPL3Q86UP9 236 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 ATCAYQ86WG3 371 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 BMPERQ8N8U9 685 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 OR10H4Q8NGA5 316 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 OR2I1PQ8NGU4 316 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 GPR119Q8TDV5 335 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 DUSP19Q8WTR2 217 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 GATAD2BQ8WXI9 593 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 RPL3LQ92901 407 aaKnown RBP10.14□□□□□ -0.79
SKA2-204ENST00000578519 PTP4A1Q93096 173 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 DDIT4LQ96D03 193 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 TAAR9Q96RI9 348 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 MED18Q9BUE0 208 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 ZNF700Q9H0M5 742 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 KCNN2Q9H2S1 579 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 METTL7AQ9H8H3 244 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 APMAPQ9HDC9 416 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 MMP25Q9NPA2 562 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 TAS2R16Q9NYV7 291 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 KLRF1Q9NZS2 232 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 MYOTQ9UBF9 498 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 PADI1Q9ULC6 663 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 TMED7Q9Y3B3 224 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 PTRH2Q9Y3E5 179 aaKnown RBP10.14□□□□□ -0.79
SKA2-204ENST00000578519 CORINQ9Y5Q5 1042 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 NUP210LQ5VU65 1888 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 GON4LQ3T8J9 2241 aa10.14□□□□□ -0.79
SKA2-204ENST00000578519 IGHV3-20A0A0C4DH32 117 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 TRDV1A0A1B0GX56 115 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 METTL15A6NJ78 407 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 FAM183AA6NL82 134 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 XKRYO14609 159 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 SUSD5O60279 629 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 INHBBP09529 407 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 TACSTD2P09758 323 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 RAB40ALP0C0E4 278 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 ASAH2BP0C7U1 165 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 LIMS3P0CW19 117 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 LIMS4P0CW20 117 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 HIST1H1CP16403 213 aaKnown RBP10.13□□□□□ -0.79
SKA2-204ENST00000578519 PTNP21246 168 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 CD40LGP29965 261 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 SDHAP31040 664 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 FGF9P31371 208 aaPredicted RBP10.13□□□□□ -0.79
SKA2-204ENST00000578519 DIO1P49895 249 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 ZNF41P51814 821 aaPredicted RBP10.13□□□□□ -0.79
SKA2-204ENST00000578519 GBX2P52951 348 aaPredicted RBP10.13□□□□□ -0.79
SKA2-204ENST00000578519 RPS4XP62701 263 aaKnown RBP10.13□□□□□ -0.79
SKA2-204ENST00000578519 EIF3IQ13347 325 aaKnown RBP10.13□□□□□ -0.79
SKA2-204ENST00000578519 KRR1Q13601 381 aaKnown RBP10.13□□□□□ -0.79
SKA2-204ENST00000578519 INAQ16352 499 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 SSX1Q16384 188 aa10.13□□□□□ -0.79
SKA2-204ENST00000578519 LPAL2Q16609 132 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms