RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 NDUFB2O95178 105 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 PIPP12273 146 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-208ENST00000563220 MSX1P28360 303 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 RBMS1P29558 406 aaKnown RBP16.37■□□□□ 0.21
COMMD4-208ENST00000563220 SLC6A6P31641 620 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 RPS5P46782 204 aaKnown RBP16.37■□□□□ 0.21
COMMD4-208ENST00000563220 GP2P55259 537 aaKnown RBP16.37■□□□□ 0.21
COMMD4-208ENST00000563220 ZNF362Q5T0B9 420 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-208ENST00000563220 IGFN1Q86VF2 1251 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 CYP4Z2PQ8N1L4 340 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 SVOPQ8N4V2 548 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 IL22RA1Q8N6P7 574 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 C10orf53Q8N6V4 93 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 WDSUB1Q8N9V3 476 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 TMEM234Q8WY98 164 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 PSMF1Q92530 271 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 DNAJA3Q96EY1 480 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 PROK2Q9HC23 129 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 CPNE5Q9HCH3 593 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 HINT3Q9NQE9 182 aaKnown RBP16.37■□□□□ 0.21
COMMD4-208ENST00000563220 NANSQ9NR45 359 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 VDAC3Q9Y277 283 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 ZNF99A8MXY4 864 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-208ENST00000563220 MCIDASD6RGH6 385 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 PRODHO43272 600 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 NPIPB7O75200 414 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 ASAH2BP0C7U1 165 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 CCL3P10147 92 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 RPS4XP62701 263 aaKnown RBP16.36■□□□□ 0.21
COMMD4-208ENST00000563220 SNTA1Q13424 505 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 TGIF1Q15583 401 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 TMEM81Q6P7N7 255 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 RAB43Q86YS6 212 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 BBS1Q8NFJ9 593 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 PAQR8Q8TEZ7 354 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 ST8SIA1Q92185 356 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 FRMD6Q96NE9 622 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 SECISBP2Q96T21 854 aaKnown RBP16.36■□□□□ 0.21
COMMD4-208ENST00000563220 HPF1Q9NWY4 346 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 ETAA1Q9NY74 926 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 FBXL2Q9UKC9 423 aa16.36■□□□□ 0.21
COMMD4-208ENST00000563220 FAM183AA6NL82 134 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 ACVR2AP27037 513 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 DLX5P56178 289 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 DCTN2Q13561 401 aaKnown RBP16.35■□□□□ 0.21
COMMD4-208ENST00000563220 IRF3Q14653 427 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 CPOQ8IVL8 374 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 SLC43A2Q8N370 569 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 OR2M3Q8NG83 312 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 MOSPD2Q8NHP6 518 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 ADAMTS14Q8WXS8 1223 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 RORBQ92753 470 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 C12orf43Q96C57 262 aaKnown RBP16.35■□□□□ 0.21
COMMD4-208ENST00000563220 NTNG2Q96CW9 530 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 PTDSS2Q9BVG9 487 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 ASCL3Q9NQ33 180 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 CMC2Q9NRP2 79 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 TAS2R16Q9NYV7 291 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 PCDHGB6Q9Y5F9 930 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 TRAV36DV7A0A075B6V5 113 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 SHISA8B8ZZ34 492 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 BLOC1S5-TXNDC5H3BN57 136 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 ETV2O00321 342 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-208ENST00000563220 SLC25A12O75746 678 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 BGLAPP02818 100 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 LCKP06239 509 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 PEPDP12955 493 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 CD82P27701 267 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 AQP2P41181 271 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 HTR3AP46098 478 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 DBPQ10586 325 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-208ENST00000563220 ACER2Q5QJU3 275 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 GPR107Q5VW38 600 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 DND1Q8IYX4 353 aaKnown RBP16.35■□□□□ 0.21
COMMD4-208ENST00000563220 FADS6Q8N9I5 356 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 RELTQ969Z4 430 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 THOC3Q96J01 351 aaKnown RBP16.35■□□□□ 0.21
COMMD4-208ENST00000563220 ERMAPQ96PL5 475 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-208ENST00000563220 TAPBPLQ9BX59 468 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 ANGPTL4Q9BY76 406 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 OR11A1Q9GZK7 315 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 ANKRD10Q9NXR5 420 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 CHRNA9Q9UGM1 479 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 BAIAP2Q9UQB8 552 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 HIF3AQ9Y2N7 669 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 IER3IP1Q9Y5U9 82 aa16.35■□□□□ 0.21
COMMD4-208ENST00000563220 CNOT1A5YKK6 2376 aaKnown RBP16.35■□□□□ 0.21
COMMD4-208ENST00000563220 A8MVM7 634 aa16.34■□□□□ 0.21
COMMD4-208ENST00000563220 FOXF1Q12946 379 aa16.34■□□□□ 0.21
COMMD4-208ENST00000563220 TUBA3CQ13748 450 aa16.34■□□□□ 0.21
COMMD4-208ENST00000563220 SYT6Q5T7P8 510 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-208ENST00000563220 SLC22A10Q63ZE4 541 aa16.34■□□□□ 0.21
COMMD4-208ENST00000563220 PLBD1Q6P4A8 553 aa16.34■□□□□ 0.21
COMMD4-208ENST00000563220 DPY19L2P2Q6ZN68 376 aa16.34■□□□□ 0.21
COMMD4-208ENST00000563220 CXXC5Q7LFL8 322 aaKnown RBP16.34■□□□□ 0.21
COMMD4-208ENST00000563220 TMPRSS7Q7RTY8 843 aa16.34■□□□□ 0.21
COMMD4-208ENST00000563220 MDGA2Q7Z553 956 aa16.34■□□□□ 0.21
COMMD4-208ENST00000563220 LRRC75AQ8NAA5 344 aa16.34■□□□□ 0.21
COMMD4-208ENST00000563220 PTP4A1Q93096 173 aa16.34■□□□□ 0.21
COMMD4-208ENST00000563220 HCAR1Q9BXC0 346 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms