RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 AQP5P55064 265 aa22.29■■□□□ 1.16
NME3-202ENST00000561637 H3F3AP84243 136 aa22.29■■□□□ 1.16
NME3-202ENST00000561637 BSPH1Q075Z2 132 aa22.29■■□□□ 1.16
NME3-202ENST00000561637 GNA13Q14344 377 aa22.29■■□□□ 1.16
NME3-202ENST00000561637 RGNQ15493 299 aa22.29■■□□□ 1.16
NME3-202ENST00000561637 PAGE3Q5JUK9 113 aa22.29■■□□□ 1.16
NME3-202ENST00000561637 SERPINA11Q86U17 422 aa22.29■■□□□ 1.16
NME3-202ENST00000561637 COMTD1Q86VU5 262 aa22.29■■□□□ 1.16
NME3-202ENST00000561637 OR52E4Q8NGH9 312 aa22.29■■□□□ 1.16
NME3-202ENST00000561637 PIGXQ8TBF5 258 aa22.29■■□□□ 1.16
NME3-202ENST00000561637 ZHX1-C8orf76Q96EF9 292 aa22.29■■□□□ 1.16
NME3-202ENST00000561637 THOC1Q96FV9 657 aaKnown RBP22.29■■□□□ 1.16
NME3-202ENST00000561637 NBEAL1Q6ZS30 2694 aa22.29■■□□□ 1.16
NME3-202ENST00000561637 A0A1W2PR80 420 aa22.28■■□□□ 1.16
NME3-202ENST00000561637 CLIC1O00299 241 aa22.28■■□□□ 1.16
NME3-202ENST00000561637 ZNF208O43345 1280 aa22.28■■□□□ 1.16
NME3-202ENST00000561637 RAD51DO75771 328 aa22.28■■□□□ 1.16
NME3-202ENST00000561637 HTR3AP46098 478 aa22.28■■□□□ 1.16
NME3-202ENST00000561637 CLK1P49759 484 aaKnown RBP22.28■■□□□ 1.16
NME3-202ENST00000561637 SLC16A1P53985 500 aa22.28■■□□□ 1.16
NME3-202ENST00000561637 ADAM5Q6NVV9 412 aa22.28■■□□□ 1.16
NME3-202ENST00000561637 UBE2J2Q8N2K1 259 aa22.28■■□□□ 1.16
NME3-202ENST00000561637 ZNF611Q8N823 705 aa22.28■■□□□ 1.16
NME3-202ENST00000561637 APH1AQ96BI3 265 aa22.28■■□□□ 1.16
NME3-202ENST00000561637 DDIT4LQ96D03 193 aa22.28■■□□□ 1.16
NME3-202ENST00000561637 IKZF5Q9H5V7 419 aa22.28■■□□□ 1.16
NME3-202ENST00000561637 A0A096LPI6 279 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 CD3EP07766 207 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 SOD3P08294 240 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 MAGEA8P43361 318 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 MRPL19P49406 292 aaKnown RBP22.27■■□□□ 1.16
NME3-202ENST00000561637 STX1BP61266 288 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 CEACAM7Q14002 265 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 PPA1Q15181 289 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 RNF220Q5VTB9 566 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 C9orf135Q5VTT2 229 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 FBXW9Q5XUX1 488 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 BLOC1S3Q6QNY0 202 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 CASP12Q6UXS9 341 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 TMEM99Q8N816 258 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 PMM1Q92871 262 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 CALML5Q9NZT1 146 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 CCDC167Q9P0B6 97 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 LAMP3Q9UQV4 416 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 TRAPPC4Q9Y296 219 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 FLVCR1Q9Y5Y0 555 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 ABCA1O95477 2261 aa22.27■■□□□ 1.16
NME3-202ENST00000561637 DNPH1O43598 174 aa22.26■■□□□ 1.15
NME3-202ENST00000561637 AKR7A3O95154 331 aa22.26■■□□□ 1.15
NME3-202ENST00000561637 SLC35A1P78382 337 aa22.26■■□□□ 1.15
NME3-202ENST00000561637 OR7A5Q15622 319 aa22.26■■□□□ 1.15
NME3-202ENST00000561637 HMBOX1Q6NT76 420 aa22.26■■□□□ 1.15
NME3-202ENST00000561637 ZNF440Q8IYI8 595 aa22.26■■□□□ 1.15
NME3-202ENST00000561637 MAPK1IP1LQ8NDC0 245 aa22.26■■□□□ 1.15
NME3-202ENST00000561637 TMEM171Q8WVE6 324 aa22.26■■□□□ 1.15
NME3-202ENST00000561637 SPDL1Q96EA4 605 aa22.26■■□□□ 1.15
NME3-202ENST00000561637 CCDC28BQ9BUN5 200 aa22.26■■□□□ 1.15
NME3-202ENST00000561637 A4GALTQ9NPC4 353 aa22.26■■□□□ 1.15
NME3-202ENST00000561637 A0A0G2JPF8 293 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 LIPT2A6NK58 231 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 HNRNPCL2B2RXH8 293 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 HNRNPCL3B7ZW38 293 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 HNRNPCL1O60812 293 aaKnown RBP22.25■■□□□ 1.15
NME3-202ENST00000561637 PGM3O95394 542 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 TGDSO95455 350 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 THBS1P07996 1170 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 ITGA5P08648 1049 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 HNRNPCL4P0DMR1 293 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 BMP2P12643 396 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 GGT1P19440 569 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 FAPQ12884 760 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 TNK1Q13470 666 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 LRIF1Q5T3J3 769 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 ZIC4Q8N9L1 334 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 OR52N5Q8NH56 324 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 NFKBIDQ8NI38 313 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 C3orf49Q96BT1 292 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 SPATA9Q9BWV2 254 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 ESRP2Q9H6T0 727 aaKnown RBP22.25■■□□□ 1.15
NME3-202ENST00000561637 VAPAQ9P0L0 249 aa22.25■■□□□ 1.15
NME3-202ENST00000561637 OR5H1A6NKK0 313 aa22.24■■□□□ 1.15
NME3-202ENST00000561637 MRPL33O75394 65 aaKnown RBP22.24■■□□□ 1.15
NME3-202ENST00000561637 UQCRBP14927 111 aa22.24■■□□□ 1.15
NME3-202ENST00000561637 PTNP21246 168 aa22.24■■□□□ 1.15
NME3-202ENST00000561637 CXCR1P25024 350 aa22.24■■□□□ 1.15
NME3-202ENST00000561637 IDUAP35475 653 aa22.24■■□□□ 1.15
NME3-202ENST00000561637 SPOCK1Q08629 439 aa22.24■■□□□ 1.15
NME3-202ENST00000561637 SLC17A1Q14916 467 aa22.24■■□□□ 1.15
NME3-202ENST00000561637 LARS2Q15031 903 aaKnown RBP22.24■■□□□ 1.15
NME3-202ENST00000561637 AGKQ53H12 422 aa22.24■■□□□ 1.15
NME3-202ENST00000561637 ZNF311Q5JNZ3 666 aa22.24■■□□□ 1.15
NME3-202ENST00000561637 OTUD3Q5T2D3 398 aaPredicted RBP22.24■■□□□ 1.15
NME3-202ENST00000561637 WBP2NLQ6ICG8 309 aa22.24■■□□□ 1.15
NME3-202ENST00000561637 GOLGA6L1Q8N7Z2 621 aa22.24■■□□□ 1.15
NME3-202ENST00000561637 DYDC1Q8WWB3 177 aa22.24■■□□□ 1.15
NME3-202ENST00000561637 ZNF385AQ96PM9 386 aaKnown RBP22.24■■□□□ 1.15
NME3-202ENST00000561637 SLC7A10Q9NS82 523 aa22.24■■□□□ 1.15
NME3-202ENST00000561637 ZNF701Q9NV72 531 aaPredicted RBP22.24■■□□□ 1.15
NME3-202ENST00000561637 TRBV5-3A0A0A0MS03 114 aa22.23■■□□□ 1.15
NME3-202ENST00000561637 SHISA9B4DS77 424 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms