RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 RGS10O43665 173 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 LYPD3O95274 346 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 NPIPA8P0DM63 369 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 ICAM2P13598 275 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 CDK5Q00535 292 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 PLAURQ03405 335 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 TFF3Q07654 80 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 OR1Q1Q15612 314 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 SLC25A30Q5SVS4 291 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 PDZK1Q5T2W1 519 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 C3P1Q6ZMU1 363 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 ZNF550Q7Z398 422 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 LAPTM4BQ86VI4 370 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 NKAIN4Q8IVV8 208 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 CCDC103Q8IW40 242 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 ZNF440Q8IYI8 595 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 GHDCQ8N2G8 530 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 OR4N2Q8NGD1 307 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 SLC2A12Q8TD20 617 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 MYDGFQ969H8 173 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 MUL1Q969V5 352 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 HS6ST2Q96MM7 605 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 DOK1Q99704 481 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 PRSS27Q9BQR3 290 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 TRIM2Q9C040 744 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 VN1R1Q9GZP7 353 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 SLC24A3Q9HC58 644 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 CTPS2Q9NRF8 586 aa18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 MRTO4Q9UKD2 239 aaKnown RBP18.12■□□□□ 0.49
CTDSP2-204ENST00000548823 VPS13CQ709C8 3753 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 CCDC160A6NGH7 325 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 CLCA1A8K7I4 914 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 IL33O95760 270 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 DCKP27707 260 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 HTR2AP28223 471 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 MSX1P28360 303 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 GSTT1P30711 240 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 EMP2P54851 167 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 NSDHLQ15738 373 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 NEDD8Q15843 81 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 SMN1Q16637 294 aaKnown RBP18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 MFSD4BQ5TF39 518 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 B3GNT6Q6ZMB0 384 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 PTCHD4Q6ZW05 846 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 LSMEM1Q8N8F7 131 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 OR8J1Q8NGP2 316 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 SPATA3Q8NHX4 192 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 ASB5Q8WWX0 329 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 SGCDQ92629 289 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 LCORQ96JN0 433 aaPredicted RBP18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 Q96MT0 163 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 POLDIP3Q9BY77 421 aaKnown RBP18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 TMEM27Q9HBJ8 222 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 CLN6Q9NWW5 311 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 DNAJB12Q9NXW2 375 aaKnown RBP18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 CNOT2Q9NZN8 540 aaKnown RBP18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 ERVK-18Q9QC07 812 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 ST6GALNAC2Q9UJ37 374 aa18.11■□□□□ 0.49
CTDSP2-204ENST00000548823 IDSB3KWA1 339 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 H3BN98 237 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 TO15178 435 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 HOXD4P09016 255 aaPredicted RBP18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 PRG2P13727 222 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 POU1F1P28069 291 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 GIPRP48546 466 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 EFNA3P52797 238 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 HOXC5Q00444 222 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 OCLNQ16625 522 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 CASP12Q6UXS9 341 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 SIAH3Q8IW03 269 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 C17orf47Q8NEP4 570 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 LILRB4Q8NHJ6 448 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 CNOT9Q92600 299 aaKnown RBP18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 ADIPOR1Q96A54 375 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 GPA33Q99795 319 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 AASSQ9UDR5 926 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 SLC7A7Q9UM01 511 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 SLC35A3Q9Y2D2 325 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 NSD1Q96L73 2696 aaPredicted RBP18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 RTTNQ86VV8 2226 aa18.1■□□□□ 0.49
CTDSP2-204ENST00000548823 SERINC4A6NH21 518 aa18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 PIPP12273 146 aaPredicted RBP18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 ACAA2P42765 397 aaKnown RBP18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 ADAM8P78325 824 aa18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 EMX1Q04741 257 aaPredicted RBP18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 TMEM236Q5W0B7 351 aa18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 POGLUT1Q8NBL1 392 aa18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 FCGR1BQ92637 280 aa18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 MPP4Q96JB8 637 aa18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 FRMD6Q96NE9 622 aa18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 ZNF700Q9H0M5 742 aa18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 UBQLN4Q9NRR5 601 aa18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 ZNF223Q9UK11 482 aaPredicted RBP18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 MKL2Q9ULH7 1088 aa18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 TMEM5Q9Y2B1 443 aa18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 JMJD1CQ15652 2540 aa18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 CSPG4Q6UVK1 2322 aa18.09■□□□□ 0.49
CTDSP2-204ENST00000548823 LOC102723996A0A087X1L8 192 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 A0A0B4J2E0 115 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 A0A1B0GX12 115 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms