RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SNTA1Q13424 505 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 NADK2Q4G0N4 442 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 CLEC12AQ5QGZ9 265 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 SLC27A4Q6P1M0 643 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 TMEM81Q6P7N7 255 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 PTCHD4Q6ZW05 846 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 GALNTL5Q7Z4T8 443 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 TSSK6Q9BXA6 273 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 SH2D2AQ9NP31 389 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 BATF3Q9NR55 127 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 LUZP4Q9P127 313 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 XPNPEP2O43895 674 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 WISP1O95388 367 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 FXYD6P3P58550 94 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 TEX19Q8NA77 164 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 FANK1Q8TC84 345 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 SGTBQ96EQ0 304 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 SAMD8Q96LT4 415 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 OR52D1Q9H346 318 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 BLOC1S6Q9UL45 172 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 SIGLEC7Q9Y286 467 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 B3GNT3Q9Y2A9 372 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 EML6Q6ZMW3 1958 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 MPZL2O60487 215 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 CLPTM1O96005 669 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 CXCR1P25024 350 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 MSX1P28360 303 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 EGR4Q05215 589 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 ZNF169Q14929 603 aaPredicted RBP25.15■■□□□ 1.62
CCM2-218ENST00000541586 PLEKHN1Q494U1 663 aaPredicted RBP25.15■■□□□ 1.62
CCM2-218ENST00000541586 Q6ZS92 163 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 TVP23BQ9NYZ1 205 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 IL20RAQ9UHF4 553 aa25.15■■□□□ 1.62
CCM2-218ENST00000541586 EEF1B2P24534 225 aaKnown RBP25.14■■□□□ 1.61
CCM2-218ENST00000541586 POLR2HP52434 150 aaKnown RBP25.14■■□□□ 1.61
CCM2-218ENST00000541586 INPP5JQ15735 1006 aaPredicted RBP25.14■■□□□ 1.61
CCM2-218ENST00000541586 SLC30A6Q6NXT4 461 aa25.14■■□□□ 1.61
CCM2-218ENST00000541586 POMZP3Q6PJE2 187 aa25.14■■□□□ 1.61
CCM2-218ENST00000541586 GRINAQ7Z429 371 aa25.14■■□□□ 1.61
CCM2-218ENST00000541586 OAFQ86UD1 273 aa25.14■■□□□ 1.61
CCM2-218ENST00000541586 SULF2Q8IWU5 870 aa25.14■■□□□ 1.61
CCM2-218ENST00000541586 TMEM178AQ8NBL3 297 aa25.14■■□□□ 1.61
CCM2-218ENST00000541586 TMEM234Q8WY98 164 aa25.14■■□□□ 1.61
CCM2-218ENST00000541586 JSRP1Q96MG2 331 aaPredicted RBP25.14■■□□□ 1.61
CCM2-218ENST00000541586 FRMD6Q96NE9 622 aa25.14■■□□□ 1.61
CCM2-218ENST00000541586 IL4I1Q96RQ9 567 aa25.14■■□□□ 1.61
CCM2-218ENST00000541586 TRAV27A0A087WT01 109 aa25.13■■□□□ 1.61
CCM2-218ENST00000541586 A0A087WXM4 84 aa25.13■■□□□ 1.61
CCM2-218ENST00000541586 LRRN3E7EW58 273 aa25.13■■□□□ 1.61
CCM2-218ENST00000541586 PTP4A3O75365 173 aa25.13■■□□□ 1.61
CCM2-218ENST00000541586 IGF2P01344 180 aa25.13■■□□□ 1.61
CCM2-218ENST00000541586 CCNA2P20248 432 aa25.13■■□□□ 1.61
CCM2-218ENST00000541586 DNASE1L1P49184 302 aa25.13■■□□□ 1.61
CCM2-218ENST00000541586 TEKQ02763 1124 aa25.13■■□□□ 1.61
CCM2-218ENST00000541586 ARSKQ6UWY0 536 aa25.13■■□□□ 1.61
CCM2-218ENST00000541586 OR4Q3Q8NH05 313 aa25.13■■□□□ 1.61
CCM2-218ENST00000541586 OR51A7Q8NH64 312 aa25.13■■□□□ 1.61
CCM2-218ENST00000541586 TRUB1Q8WWH5 349 aaKnown RBP25.13■■□□□ 1.61
CCM2-218ENST00000541586 ST8SIA1Q92185 356 aa25.13■■□□□ 1.61
CCM2-218ENST00000541586 SGCDQ92629 289 aa25.13■■□□□ 1.61
CCM2-218ENST00000541586 DEPPQ9NTK1 212 aa25.13■■□□□ 1.61
CCM2-218ENST00000541586 HCN1O60741 890 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 RCBTB2O95199 551 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 CH25HO95992 272 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 CNR1P21554 472 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 GABARAPL2P60520 117 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 SNRPGP62308 76 aaKnown RBP25.12■■□□□ 1.61
CCM2-218ENST00000541586 SLC6A19Q695T7 634 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 RPL13AP3Q6NVV1 102 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 SLC46A3Q7Z3Q1 461 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 SCMH1Q96GD3 660 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 ANGPTL4Q9BY76 406 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 PAK1IP1Q9NWT1 392 aaPredicted RBP25.12■■□□□ 1.61
CCM2-218ENST00000541586 TUBA8Q9NY65 449 aaPredicted RBP25.12■■□□□ 1.61
CCM2-218ENST00000541586 KLF13Q9Y2Y9 288 aaPredicted RBP25.12■■□□□ 1.61
CCM2-218ENST00000541586 A0A0G2JMM0 328 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 A0A1W2PPB8 328 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 A0A1W2PRS3 328 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 HTR3EA5X5Y0 456 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 KIR3DP1A8MWS1 328 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 NME2P1O60361 137 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 TFAP2AP05549 437 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 PRKCAP17252 672 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 NME2P22392 152 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 PCYT1AP49585 367 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 TUBA4AP68366 448 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 FHL1Q13642 323 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 SMARCD3Q6STE5 483 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 PNPLA5Q7Z6Z6 429 aaPredicted RBP25.12■■□□□ 1.61
CCM2-218ENST00000541586 ADGRG3Q86Y34 549 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 LRRC17Q8N6Y2 441 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 TCEANCQ8N8B7 351 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 WDSUB1Q8N9V3 476 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 OR2T33Q8NG76 320 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 OR8J1Q8NGP2 316 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 WBP1Q96G27 269 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 TNFRSF13CQ96RJ3 184 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 POLDIP3Q9BY77 421 aaKnown RBP25.12■■□□□ 1.61
CCM2-218ENST00000541586 ENKD1Q9H0I2 346 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 PROK2Q9HC23 129 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms