RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 COPS3Q9UNS2 423 aa7.59□□□□□ -1.19
CTNND1-234ENST00000532844 MEGF11A6BM72 1044 aa7.59□□□□□ -1.19
CTNND1-234ENST00000532844 SYT7O43581 403 aa7.59□□□□□ -1.19
CTNND1-234ENST00000532844 ETV6P41212 452 aa7.59□□□□□ -1.19
CTNND1-234ENST00000532844 CLDN2P57739 230 aa7.59□□□□□ -1.19
CTNND1-234ENST00000532844 NKX3-2P78367 333 aa7.59□□□□□ -1.19
CTNND1-234ENST00000532844 SLC14A1Q13336 389 aa7.59□□□□□ -1.19
CTNND1-234ENST00000532844 OR52R1Q8NGF1 315 aa7.59□□□□□ -1.19
CTNND1-234ENST00000532844 CLSTN3Q9BQT9 956 aa7.59□□□□□ -1.19
CTNND1-234ENST00000532844 SCML1Q9UN30 329 aa7.59□□□□□ -1.19
CTNND1-234ENST00000532844 FAM96BQ9Y3D0 163 aa7.59□□□□□ -1.19
CTNND1-234ENST00000532844 YTHDF2Q9Y5A9 579 aaKnown RBP7.59□□□□□ -1.19
CTNND1-234ENST00000532844 TRAF3IP2O43734 574 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 HPGDSO60760 199 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 AKAIN1P0CW23 69 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 PNMTP11086 282 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 FUT1P19526 365 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 NFYAP23511 347 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 GABRB3P28472 473 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 DEFB103AP81534 67 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 HNRNPA1L2Q32P51 320 aaKnown RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 ENTPD8Q5MY95 495 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 CCNJQ5T5M9 372 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 MAVSQ7Z434 540 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 OR6T1Q8NGN1 323 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 OR51Q1Q8NH59 317 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 TMEM163Q8TC26 289 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 LKAAEAR1Q8TD35 194 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 ZNF480Q8WV37 535 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 MRPL38Q96DV4 380 aaKnown RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 NIPSNAP3BQ9BS92 247 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 NICN1Q9BSH3 213 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 SLC46A2Q9BY10 475 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 ZNF355PQ9NSJ1 428 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 KLHL42Q9P2K6 505 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 ANKUB1A6NFN9 424 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 SH2D7A6NKC9 451 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 ICMTO60725 284 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 RAB3AP20336 220 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 PSMB10P40306 273 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 TAF9Q16594 264 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 Q1RN00 199 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 TMEM31Q5JXX7 168 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 ZNF836Q6ZNA1 936 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 Q6ZSR6 202 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 ZNF546Q86UE3 836 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 HLA-CQ95604 372 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 SNX18Q96RF0 628 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 PRRT1Q99946 306 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 NT5DC2Q9H857 520 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 PLCH1Q4KWH8 1693 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 ALS2Q96Q42 1657 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 A0A1B0GUL6 1792 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 TRAV27A0A087WT01 109 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 LOC105369274A0A096LPK9 316 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 CDK4P11802 303 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 PPP3CBP16298 524 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 HOXD9P28356 352 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 WDR5P61964 334 aaKnown RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 TRA2BP62995 288 aaKnown RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 SLC7A9P82251 487 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 EXOSC7Q15024 291 aaKnown RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 NR0B2Q15466 257 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 MEX3BQ6ZN04 569 aaKnown RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 SLC35F3Q8IY50 421 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 OR4N4Q8N0Y3 316 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 NLGN4YQ8NFZ3 816 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 OR8U1Q8NH10 309 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 GOT1L1Q8NHS2 421 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 SYNPRQ8TBG9 265 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 ZBTB8AQ96BR9 441 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 ELP4Q96EB1 424 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 SLC39A13Q96H72 371 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 CPPED1Q9BRF8 314 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 CNOT2Q9NZN8 540 aaKnown RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 A0A087WUU8 490 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 A0A0A6YYC8 382 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 LOC102723532A0A0G2JNH3 316 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 ZNF736B4DX44 427 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 I3L1I5 382 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 FBXO24O75426 580 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 UBL4AP11441 157 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 SSTR2P30874 369 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 FOLR3P41439 243 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 ERVFC1P60507 584 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 MRPS34P82930 218 aaKnown RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 TAP2Q03519 686 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 SERTAD2Q14140 314 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 MEF2DQ14814 521 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 C4orf36Q96KX1 117 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 C1QTNF2Q9BXJ5 285 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 OR6C2Q9NZP2 312 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 C7orf72A4D263 438 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 HLA-HP01893 362 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 CRYBA1P05813 215 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 TMEM225BP0DP42 221 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 HOXD11P31277 338 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-234ENST00000532844 SLC6A11P48066 632 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 RAP2BP61225 183 aa7.58□□□□□ -1.2
CTNND1-234ENST00000532844 IL13RA1P78552 427 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms