RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SLAMF1Q13291 335 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 EFR3AQ14156 821 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 NAA25Q14CX7 972 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 HERC3Q15034 1050 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 NCF4Q15080 339 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 CEBPEQ15744 281 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 HIST2H2ACQ16777 129 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 TUBB8Q3ZCM7 444 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 MMEL1Q495T6 779 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 HSP90B2PQ58FF3 399 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 CCNYL2Q5T2Q4 361 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 IL23RQ5VWK5 629 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 MLIPQ5VWP3 458 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 CRYBG3Q68DQ2 2970 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 HIST2H2AA3Q6FI13 130 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 FAAH2Q6GMR7 532 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 FAM71E1Q6IPT2 247 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 NOXRED1Q6NXP6 359 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 TRIM40Q6P9F5 258 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ABHD13Q7L211 337 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 MOGAT3Q86VF5 341 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 NUDT13Q86X67 352 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ZGRF1Q86YA3 2104 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 CRLF3Q8IUI8 442 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 FUNDC1Q8IVP5 155 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 FOXRED2Q8IWF2 684 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 OR4N5Q8IXE1 308 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 RIMKLAQ8IXN7 391 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 C1orf87Q8N0U7 546 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ZCCHC7Q8N3Z6 543 aaKnown RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 LIX1Q8N485 282 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ARFGAP2Q8N6H7 521 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF321PQ8N8H1 164 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 FNDC5Q8NAU1 212 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 OR9I1Q8NGQ6 314 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 BBS10Q8TAM1 723 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 C16orf78Q8WTQ4 265 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 DYDC1Q8WWB3 177 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 N4BP2L2Q92802 583 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 MR1Q95460 341 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 UBE2E3Q969T4 207 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 CIDECQ96AQ7 238 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ANKRD9Q96BM1 317 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 C8orf44Q96CB5 159 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 TUBGCP3Q96CW5 907 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 CNRIP1Q96F85 164 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF578Q96N58 590 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 CATSPER2Q96P56 530 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 TSSK3Q96PN8 268 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 SERINC2Q96SA4 455 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 SERPINI1Q99574 410 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 NPAS2Q99743 824 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 TBCDQ9BTW9 1192 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 NLNQ9BYT8 704 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 TRIM4Q9C037 500 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 VN1R1Q9GZP7 353 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ILKAPQ9H0C8 392 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 SLC26A1Q9H2B4 701 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ESRP2Q9H6T0 727 aaKnown RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ANKRA2Q9H9E1 313 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 FANCEQ9HB96 536 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 LRTM1Q9HBL6 345 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 EML4Q9HC35 981 aaKnown RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ANKHQ9HCJ1 492 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 MKKSQ9NPJ1 570 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 AIG1Q9NVV5 245 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 C1orf109Q9NX04 203 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 TRPC4Q9UBN4 977 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF223Q9UK11 482 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 STK38LQ9Y2H1 464 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 PTRH2Q9Y3E5 179 aaKnown RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 UTP20O75691 2785 aaKnown RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 LRBAP50851 2863 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 SVILO95425 2214 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 DCHS2Q6V1P9 2916 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PCLOQ9Y6V0 5065 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 ITPR2Q14571 2701 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 MTORP42345 2549 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 IGKV3D-15A0A087WSY6 115 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 LOC102723996A0A087X1L8 192 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 IGHV1-45A0A0A0MS14 117 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 A0A0G2JND7 137 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 GNG14A0A1W2PPG7 69 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 A0A1W2PQ72 361 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 URADA6NGE7 173 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 SERINC4A6NH21 518 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 GABRR3A8MPY1 467 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PMS2P5A8MQ11 134 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 A8MUA0 341 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 MYO1GB0I1T2 1018 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 IDSB3KWA1 339 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 K7EM74 188 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 SLC28A1O00337 649 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 TXNDC9O14530 226 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 SCAMP2O15127 329 aaKnown RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 KLK10O43240 276 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 SNX3O60493 162 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF354AO60765 605 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 DIAPH2O60879 1101 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 SCN2BO60939 215 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms