RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 ATP6V1E2Q96A05 226 aa6.57□□□□□ -1.36
VPS45-210ENST00000497638 EXOSC8Q96B26 276 aaKnown RBP6.57□□□□□ -1.36
VPS45-210ENST00000497638 TMEM186Q96B77 213 aa6.57□□□□□ -1.36
VPS45-210ENST00000497638 RBBP8Q99708 897 aa6.57□□□□□ -1.36
VPS45-210ENST00000497638 CPNE1Q99829 537 aa6.57□□□□□ -1.36
VPS45-210ENST00000497638 SLC35C2Q9NQQ7 365 aa6.57□□□□□ -1.36
VPS45-210ENST00000497638 HIF1ANQ9NWT6 349 aa6.57□□□□□ -1.36
VPS45-210ENST00000497638 NMRK1Q9NWW6 199 aa6.57□□□□□ -1.36
VPS45-210ENST00000497638 TAS2R16Q9NYV7 291 aa6.57□□□□□ -1.36
VPS45-210ENST00000497638 EMC3Q9P0I2 261 aa6.57□□□□□ -1.36
VPS45-210ENST00000497638 NFU1Q9UMS0 254 aa6.57□□□□□ -1.36
VPS45-210ENST00000497638 C19orf53Q9UNZ5 99 aaPredicted RBP6.57□□□□□ -1.36
VPS45-210ENST00000497638 SLC12A4Q9UP95 1085 aa6.57□□□□□ -1.36
VPS45-210ENST00000497638 AMDHD2Q9Y303 409 aa6.57□□□□□ -1.36
VPS45-210ENST00000497638 GOLGA6L10A0A0M3HER8 536 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 A0A1W2PR80 420 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 PGRMC1O00264 195 aaKnown RBP6.56□□□□□ -1.36
VPS45-210ENST00000497638 CYTIPO60759 359 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 TMEM127O75204 238 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 SPDEFO95238 335 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 OXSR1O95747 527 aaPredicted RBP6.56□□□□□ -1.36
VPS45-210ENST00000497638 GASTP01350 101 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 LPLP06858 475 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 LINGO3P0C6S8 592 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 DDX5P17844 614 aaKnown RBP6.56□□□□□ -1.36
VPS45-210ENST00000497638 SLC7A1P30825 629 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 SERPINF1P36955 418 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 ZNF75DP51815 510 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 CCNG1P51959 295 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 FOXF1Q12946 379 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 DLG1Q12959 904 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 SLC29A2Q14542 456 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 EFNB3Q15768 340 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 PFKFB4Q16877 469 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 TMEM176BQ3YBM2 270 aaPredicted RBP6.56□□□□□ -1.36
VPS45-210ENST00000497638 GGTA1PQ4G0N0 100 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 GLE1Q53GS7 698 aaKnown RBP6.56□□□□□ -1.36
VPS45-210ENST00000497638 RAPH1Q70E73 1250 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 UBE2J2Q8N2K1 259 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 ZNF786Q8N393 782 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 C1orf52Q8N6N3 182 aaKnown RBP6.56□□□□□ -1.36
VPS45-210ENST00000497638 FBXO36Q8NEA4 188 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 C1orf162Q8NEQ5 155 aaPredicted RBP6.56□□□□□ -1.36
VPS45-210ENST00000497638 ASB10Q8WXI3 467 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 CDKL2Q92772 493 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 MUS81Q96NY9 551 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 BBS4Q96RK4 519 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 LMF2Q9BU23 707 aaKnown RBP6.56□□□□□ -1.36
VPS45-210ENST00000497638 PLK3Q9H4B4 646 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 ELOVL6Q9H5J4 265 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 NOL11Q9H8H0 719 aaKnown RBP6.56□□□□□ -1.36
VPS45-210ENST00000497638 BRF2Q9HAW0 419 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 DDX18Q9NVP1 670 aaKnown RBP6.56□□□□□ -1.36
VPS45-210ENST00000497638 ASB6Q9NWX5 421 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 MED29Q9NX70 200 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 MALT1Q9UDY8 824 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 MCM8Q9UJA3 840 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 WBP11Q9Y2W2 641 aaKnown RBP6.56□□□□□ -1.36
VPS45-210ENST00000497638 PTGDR2Q9Y5Y4 395 aa6.56□□□□□ -1.36
VPS45-210ENST00000497638 CMYA5Q8N3K9 4069 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 IGHV3-15A0A0B4J1V0 119 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 A0A1W2PQD3 144 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 OR7A17O14581 309 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 ZNF195O14628 629 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 IGKV1D-16P01601 117 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 TFP02787 698 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 MSMBP08118 114 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 IL3P08700 152 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 IFI6P09912 130 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 HPGDP15428 266 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 CRABP2P29373 138 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 TYK2P29597 1187 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 LCN1P31025 176 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 PRIM2P49643 509 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 LGALS4P56470 323 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 UBA52P62987 128 aaKnown RBP6.55□□□□□ -1.36
VPS45-210ENST00000497638 TRAF3Q13114 568 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 SELENBP1Q13228 472 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 CCNIQ14094 377 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 HEPACAMQ14CZ8 416 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 GABRA6Q16445 453 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 SGO1Q5FBB7 561 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 CT83Q5H943 113 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 SPATA19Q7Z5L4 167 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 CCDC91Q7Z6B0 441 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 OR2L13Q8N349 312 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 GATSQ8NAP1 163 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 OR51F2Q8NH61 342 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 B4GALNT2Q8NHY0 566 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 WDR60Q8WVS4 1066 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 ZNF75CPQ92670 426 aaPredicted RBP6.55□□□□□ -1.36
VPS45-210ENST00000497638 APH1AQ96BI3 265 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 SH3YL1Q96HL8 342 aaPredicted RBP6.55□□□□□ -1.36
VPS45-210ENST00000497638 PBKQ96KB5 322 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 ZNF300Q96RE9 604 aaPredicted RBP6.55□□□□□ -1.36
VPS45-210ENST00000497638 KCNS3Q9BQ31 491 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 C1QTNF6Q9BXI9 259 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 CDC42EP4Q9H3Q1 356 aaKnown RBP6.55□□□□□ -1.36
VPS45-210ENST00000497638 CA10Q9NS85 328 aa6.55□□□□□ -1.36
VPS45-210ENST00000497638 TESQ9UGI8 421 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms