RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 WIF1Q9Y5W5 379 aa6.38□□□□□ -1.39
SHQ1-207ENST00000475558 TRAV36DV7A0A075B6V5 113 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 NPIPA5A0A0B4J1W7 369 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 TRBV4-1A0A0J9YWV2 114 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 IRGMA1A4Y4 181 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 SH3D21A4FU49 640 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 CLDN24A6NM45 220 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 EFCAB9A8MZ26 197 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 NPIPA7E9PJI5 369 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 IMPA2O14732 288 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 SEC14L5O43304 696 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 PRKNO60260 465 aaPredicted RBP6.37□□□□□ -1.39
SHQ1-207ENST00000475558 TNFAIP8O95379 198 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 NPIPA8P0DM63 369 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 SOX3P41225 446 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 OMPP47874 163 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 MASP1P48740 699 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 CCR4P51679 360 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 CHN2P52757 468 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 GAS1P54826 345 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 IL1RL1Q01638 556 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 OC90Q02509 493 aaPredicted RBP6.37□□□□□ -1.39
SHQ1-207ENST00000475558 MFAP5Q13361 173 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 TMED1Q13445 227 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 IL10RAQ13651 578 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 ATP1A4Q13733 1029 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 PDK3Q15120 406 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 RBM48Q5RL73 367 aaKnown RBP6.37□□□□□ -1.39
SHQ1-207ENST00000475558 TIGD3Q6B0B8 471 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 SLC25A25Q6KCM7 469 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 SLC27A4Q6P1M0 643 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 PGBD2Q6P3X8 592 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 TBPL2Q6SJ96 375 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 APOOLQ6UXV4 268 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 USP51Q70EK9 711 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 ZER1Q7Z7L7 766 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 TMEM179BQ7Z7N9 219 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 EPHX4Q8IUS5 362 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 NRMQ8IXM6 262 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 TMEM178AQ8NBL3 297 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 FAM98AQ8NCA5 519 aaKnown RBP6.37□□□□□ -1.39
SHQ1-207ENST00000475558 OR52L1Q8NGH7 329 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 OR8J1Q8NGP2 316 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 TEX47Q8TBZ9 253 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 RNF217Q8TC41 542 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 BRIX1Q8TDN6 353 aaKnown RBP6.37□□□□□ -1.39
SHQ1-207ENST00000475558 PSMF1Q92530 271 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 NTNG2Q96CW9 530 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 DDIT4LQ96D03 193 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 SNRNP40Q96DI7 357 aaKnown RBP6.37□□□□□ -1.39
SHQ1-207ENST00000475558 BPIFA2Q96DR5 249 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 SGTBQ96EQ0 304 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 NODALQ96S42 347 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 SMAD5Q99717 465 aaKnown RBP6.37□□□□□ -1.39
SHQ1-207ENST00000475558 FAM173AQ9BQD7 235 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 PRSS27Q9BQR3 290 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 PIGQQ9BRB3 760 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 TOR3AQ9H497 397 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 SH2D2AQ9NP31 389 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 BATF3Q9NR55 127 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 ASF1BQ9NVP2 202 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 TUBA8Q9NY65 449 aaPredicted RBP6.37□□□□□ -1.39
SHQ1-207ENST00000475558 H2AFY2Q9P0M6 372 aaPredicted RBP6.37□□□□□ -1.39
SHQ1-207ENST00000475558 LUZP4Q9P127 313 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 LRFN1Q9P244 771 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 RHCGQ9UBD6 479 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 TMEFF2Q9UIK5 374 aaPredicted RBP6.37□□□□□ -1.39
SHQ1-207ENST00000475558 NDRG4Q9ULP0 352 aaKnown RBP6.37□□□□□ -1.39
SHQ1-207ENST00000475558 BOKQ9UMX3 212 aaPredicted RBP6.37□□□□□ -1.39
SHQ1-207ENST00000475558 TRAPPC4Q9Y296 219 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 KLF13Q9Y2Y9 288 aaPredicted RBP6.37□□□□□ -1.39
SHQ1-207ENST00000475558 TPRKBQ9Y3C4 175 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 ZNF337Q9Y3M9 751 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 CORINQ9Y5Q5 1042 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 CHCHD2Q9Y6H1 151 aaPredicted RBP6.37□□□□□ -1.39
SHQ1-207ENST00000475558 SPTBP11277 2137 aa6.37□□□□□ -1.39
SHQ1-207ENST00000475558 UNC119BA6NIH7 251 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 A6NL46 340 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 H3BN98 237 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 BCKDKO14874 412 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 AHCYL1O43865 530 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 PTP4A3O75365 173 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 OR6A2O95222 327 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 SNAP29O95721 258 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 IFNGP01579 166 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 CCDC159P0C7I6 412 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 IFI30P13284 250 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 PRG2P13727 222 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 APEHP13798 732 aaKnown RBP6.36□□□□□ -1.39
SHQ1-207ENST00000475558 ZNF17P17021 662 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 FUT1P19526 365 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 HTR2AP28223 471 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 ELK4P28324 431 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 TACR3P29371 465 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 SRD5A2P31213 254 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 GGT2P36268 569 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 CENPAP49450 140 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 IST1P53990 364 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 PER3P56645 1201 aa6.36□□□□□ -1.39
SHQ1-207ENST00000475558 ISL1P61371 349 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms