RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 CLCA1A8K7I4 914 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 EFCAB9A8MZ26 197 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 FAM47E-STBD1D6RA91 191 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 ADAM10O14672 748 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF208O43345 1280 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 OR2T1O43869 369 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 PRKNO60260 465 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 ADAM11O75078 769 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 WBP4O75554 376 aaKnown RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 ITGA10O75578 1167 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 SMNDC1O75940 238 aaKnown RBP eCLIP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 OR2J2O76002 312 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 SNX4O95219 450 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 CLIC3O95833 236 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 TFAP2AP05549 437 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 EPHA2P29317 976 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 SLC6A6P31641 620 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 APOBEC1P41238 236 aaKnown RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 ALDH3B2P48448 385 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 IDH2P48735 452 aaKnown RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 CLK1P49759 484 aaKnown RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 SH3BGRP55822 239 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 RPS4XP62701 263 aaKnown RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 HOXC5Q00444 222 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 AIMP2Q13155 320 aaKnown RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 CTU2Q2VPK5 515 aaKnown RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 PGGHGQ32M88 737 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 GLYR1Q49A26 553 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 ARHGAP11AQ6P4F7 1023 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 WDR88Q6ZMY6 472 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 PTCHD4Q6ZW05 846 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 HMGN2P46Q86SG4 172 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 GID4Q8IVV7 300 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 LNX2Q8N448 690 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 TMCO5AQ8N6Q1 288 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 FANK1Q8TC84 345 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 GPR119Q8TDV5 335 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 GRHL3Q8TE85 626 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 SLC25A43Q8WUT9 341 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 ASB15Q8WXK1 588 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 SGTBQ96EQ0 304 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 MRGPRX4Q96LA9 322 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 SIGLEC11Q96RL6 698 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 NODALQ96S42 347 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 BCL7BQ9BQE9 202 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 PTGES2Q9H7Z7 377 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 FKRPQ9H9S5 495 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 MEPEQ9NQ76 525 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 MRPS18AQ9NVS2 196 aaKnown RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 FKBP14Q9NWM8 211 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 P4HTMQ9NXG6 502 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 TAS2R10Q9NYW0 307 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 ABI3Q9P2A4 366 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF229Q9UJW7 825 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 FBXL4Q9UKA2 621 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 SIGLEC7Q9Y286 467 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 CARD8Q9Y2G2 431 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF337Q9Y3M9 751 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 RPL36Q9Y3U8 105 aaKnown RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 SNX5Q9Y5X3 404 aa8.31□□□□□ -1.08
PTPRE-207ENST00000471218 SPIN1Q9Y657 262 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-207ENST00000471218 TRAV36DV7A0A075B6V5 113 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 A1L4Q6 167 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 NPIPB13A6NJU9 1138 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 A8MVM7 634 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 NPIPB4C9JG80 1138 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 WWP2O00308 870 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 IMPA2O14732 288 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 ARPC3O15145 178 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 PTP4A3O75365 173 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 OR7A10O76100 309 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 NTN1O95631 604 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 IFNGP01579 166 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 TSPAN19P0C672 248 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 SAGP10523 405 aaPredicted RBP8.3□□□□□ -1.08
PTPRE-207ENST00000471218 PEPDP12955 493 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 IFI30P13284 250 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 POU2F1P14859 743 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 CXCR1P25024 350 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 ELK4P28324 431 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 SLC15A1P46059 708 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 CAPZA2P47755 286 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 RPS18P62269 152 aaKnown RBP8.3□□□□□ -1.08
PTPRE-207ENST00000471218 IL10RAQ13651 578 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 GINS1Q14691 196 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 TBCEQ15813 527 aaPredicted RBP8.3□□□□□ -1.08
PTPRE-207ENST00000471218 MEP1AQ16819 746 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.3□□□□□ -1.08
PTPRE-207ENST00000471218 ZBED5Q49AG3 693 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 EMC4Q5J8M3 183 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 ANKRD34AQ69YU3 496 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 LAIR2Q6ISS4 152 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 DPY19L2P2Q6ZN68 376 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 OAFQ86UD1 273 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 EGFL6Q8IUX8 553 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 CADM2Q8N3J6 435 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 RBMXL3Q8N7X1 1067 aaKnown RBP8.3□□□□□ -1.08
PTPRE-207ENST00000471218 FADS6Q8N9I5 356 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 ST6GALNAC3Q8NDV1 305 aa8.3□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF563Q8TA94 476 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms