RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 ZNF83P51522 516 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 SLC16A1P53985 500 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 SLC18A1P54219 525 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 MAPK11Q15759 364 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 GABRA6Q16445 453 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 OR7E24Q6IFN5 339 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 EIF3MQ7L2H7 374 aaKnown RBP13.44□□□□□ -0.26
CLCN6-207ENST00000376497 SPATA19Q7Z5L4 167 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 DEPDC4Q8N2C3 294 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 ZNF525Q8N782 197 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 PIGXQ8TBF5 258 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 PROX1Q92786 737 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 ZHX1-C8orf76Q96EF9 292 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 ARL5BQ96KC2 179 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 KCNK17Q96T54 332 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 SLCO1B3Q9NPD5 702 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 CTPS2Q9NRF8 586 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 ASB6Q9NWX5 421 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 MALT1Q9UDY8 824 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 CHRNA9Q9UGM1 479 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 HDGFL3Q9Y3E1 203 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 WDR45Q9Y484 360 aa13.44□□□□□ -0.26
CLCN6-207ENST00000376497 A0A1W2PR80 420 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 PDLIM1O00151 329 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 MRPL33O75394 65 aaKnown RBP13.43□□□□□ -0.26
CLCN6-207ENST00000376497 SASH3O75995 380 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 ITGA5P08648 1049 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 CLK1P49759 484 aaKnown RBP13.43□□□□□ -0.26
CLCN6-207ENST00000376497 KHKP50053 298 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 FOXG1P55316 489 aaPredicted RBP13.43□□□□□ -0.26
CLCN6-207ENST00000376497 MALRD1Q5VYJ5 2156 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 ATG16L1Q676U5 607 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 GRINAQ7Z429 371 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 LRRC34Q8IZ02 419 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 WDR31Q8NA23 367 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 C10orf105Q8TEF2 133 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 FAM168AQ92567 244 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 AURKBQ96GD4 344 aaPredicted RBP13.43□□□□□ -0.26
CLCN6-207ENST00000376497 PANX1Q96RD7 426 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 BEX2Q9BXY8 128 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 AMBRA1Q9C0C7 1298 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 SAP130Q9H0E3 1048 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 EXD2Q9NVH0 621 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 LPAR3Q9UBY5 353 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 SLC35A3Q9Y2D2 325 aa13.43□□□□□ -0.26
CLCN6-207ENST00000376497 TRPC5OSA6NMA1 111 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 M0R1B8 84 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 AP3D1O14617 1153 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 CSF3P09919 207 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 TFPIP10646 304 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 RYKP34925 604 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 THBS2P35442 1172 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 MVDP53602 400 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 H3F3AP84243 136 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 DPY19L1Q2PZI1 675 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 GPAT3Q53EU6 434 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 C1QTNF12Q5T7M4 302 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 AGBL2Q5U5Z8 902 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 CYB5R2Q6BCY4 276 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 ZNF621Q6ZSS3 439 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 ADGRG3Q86Y34 549 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 CCDC103Q8IW40 242 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 ZNF563Q8TA94 476 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 CNOT9Q92600 299 aaKnown RBP13.42□□□□□ -0.26
CLCN6-207ENST00000376497 HTRA1Q92743 480 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 VPS33AQ96AX1 596 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 SLC38A1Q9H2H9 487 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 POLE3Q9NRF9 147 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 DCTN4Q9UJW0 460 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 TRAPPC4Q9Y296 219 aa13.42□□□□□ -0.26
CLCN6-207ENST00000376497 AGR2O95994 175 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 IGHV4-31P0DP07 118 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 BMP4P12644 408 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 APOBEC3AP31941 199 aaPredicted RBP13.41□□□□□ -0.26
CLCN6-207ENST00000376497 MAGEA8P43361 318 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 EFNA4P52798 201 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 PDCD4Q53EL6 469 aaKnown RBP13.41□□□□□ -0.26
CLCN6-207ENST00000376497 KIRREL3Q8IZU9 778 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 C17orf78Q8N4C9 275 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 C1orf162Q8NEQ5 155 aaPredicted RBP13.41□□□□□ -0.26
CLCN6-207ENST00000376497 VPS37AQ8NEZ2 397 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 OR52E4Q8NGH9 312 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 EBF4Q9BQW3 602 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 EXOSC3Q9NQT5 275 aaKnown RBP13.41□□□□□ -0.26
CLCN6-207ENST00000376497 TMEM181Q9P2C4 612 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 AMDHD2Q9Y303 409 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 ATP23Q9Y6H3 246 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 USH1CQ9Y6N9 552 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 PMF1-BGLAPU3KQ54 211 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 STAB1Q9NY15 2570 aa13.41□□□□□ -0.26
CLCN6-207ENST00000376497 KLF11O14901 512 aa13.4□□□□□ -0.26
CLCN6-207ENST00000376497 LMX1BO60663 402 aa13.4□□□□□ -0.26
CLCN6-207ENST00000376497 SLC22A3O75751 556 aa13.4□□□□□ -0.26
CLCN6-207ENST00000376497 ETFAP13804 333 aa13.4□□□□□ -0.26
CLCN6-207ENST00000376497 CCNA2P20248 432 aa13.4□□□□□ -0.26
CLCN6-207ENST00000376497 USF1P22415 310 aaPredicted RBP13.4□□□□□ -0.26
CLCN6-207ENST00000376497 KCNJ10P78508 379 aa13.4□□□□□ -0.26
CLCN6-207ENST00000376497 LSM11P83369 360 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLCN6-207ENST00000376497 CHRNB3Q05901 458 aa13.4□□□□□ -0.26
CLCN6-207ENST00000376497 KRTAP24-1Q3LI83 254 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms