RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 E7EQL1 145 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 H0YC42 278 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 NDUFS8O00217 210 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 OR1F1O43749 312 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 GOT2P00505 430 aaKnown RBP6.18□□□□□ -1.42
H3F3A-201ENST00000366813 ZNF708P17019 499 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 TCEA1P23193 301 aaKnown RBP6.18□□□□□ -1.42
H3F3A-201ENST00000366813 HRH2P25021 359 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 PSMB4P28070 264 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 STX2P32856 288 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 HSD17B2P37059 387 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 TERF1P54274 439 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 DVL1P1P54792 670 aaPredicted RBP6.18□□□□□ -1.42
H3F3A-201ENST00000366813 TPD52P55327 224 aaPredicted RBP6.18□□□□□ -1.42
H3F3A-201ENST00000366813 SCGB2A2Q13296 93 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 KCNJ11Q14654 390 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 GUSBP1Q15486 140 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 NTRK2Q16620 822 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 NIPAL1Q6NVV3 410 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 SHQ1Q6PI26 577 aaKnown RBP6.18□□□□□ -1.42
H3F3A-201ENST00000366813 ANGPTL8Q6UXH0 198 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 CHMP1BQ7LBR1 199 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 CCDC50Q8IVM0 306 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 FOXRED2Q8IWF2 684 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 UBQLNLQ8IYU4 475 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 MUC15Q8N387 334 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 IQCF1Q8N6M8 205 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 NUBPLQ8TB37 319 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 SPPL2AQ8TCT8 520 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 NXNL1Q96CM4 212 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 DUX5Q96PT3 197 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 ALS2CR12Q96Q35 445 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 VAT1Q99536 393 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 SLC6A7Q99884 636 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 PCGF1Q9BSM1 259 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 FAM129AQ9BZQ8 928 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 HAUS4Q9H6D7 363 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 RNF122Q9H9V4 155 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 PLSCR4Q9NRQ2 329 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 SLC2A6Q9UGQ3 507 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 CLEC4AQ9UMR7 237 aa6.18□□□□□ -1.42
H3F3A-201ENST00000366813 UQCRHLA0A096LP55 91 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 A0A0G2JN53 185 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 PRMT5O14744 637 aaPredicted RBP6.17□□□□□ -1.42
H3F3A-201ENST00000366813 PSIP1O75475 530 aaKnown RBP6.17□□□□□ -1.42
H3F3A-201ENST00000366813 PDE5AO76074 875 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 SMIM10L1P0DMW3 83 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 CDH1P12830 882 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 GCH1P30793 250 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 CASP3P42574 277 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 CLDN15P56746 228 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 BTN3A2P78410 334 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 ZBED6P86452 979 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 RPS6KA1Q15418 735 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 ZSWIM7Q19AV6 140 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 ASTE1Q2TB18 679 aaPredicted RBP6.17□□□□□ -1.42
H3F3A-201ENST00000366813 SIGIRRQ6IA17 410 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 Q6ZTC4 211 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 ZNF534Q76KX8 674 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 DND1Q8IYX4 353 aaKnown RBP6.17□□□□□ -1.42
H3F3A-201ENST00000366813 CLIP4Q8N3C7 705 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 OR1J4Q8NGS1 313 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 FNDC9Q8TBE3 224 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 MRAPQ8TCY5 172 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 HAUS1Q96CS2 278 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 FAM120BQ96EK7 910 aaKnown RBP6.17□□□□□ -1.42
H3F3A-201ENST00000366813 SMIM10Q96HG1 83 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 SENP5Q96HI0 755 aaPredicted RBP6.17□□□□□ -1.42
H3F3A-201ENST00000366813 PGAM5Q96HS1 289 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 PANX3Q96QZ0 392 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 GAL3ST4Q96RP7 486 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 NGBQ9NPG2 151 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 FAM114A2Q9NRY5 505 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 DDX28Q9NUL7 540 aaKnown RBP6.17□□□□□ -1.42
H3F3A-201ENST00000366813 NSMCE4AQ9NXX6 385 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 SELENONQ9NZV5 590 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 GALPQ9UBC7 116 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 COPS7AQ9UBW8 275 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 SESN1Q9Y6P5 492 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 COL7A1Q02388 2944 aa6.17□□□□□ -1.42
H3F3A-201ENST00000366813 IGLV5-52A0A0A0MRZ9 124 aa6.16□□□□□ -1.42
H3F3A-201ENST00000366813 LOC390937A0A1W2PQ73 354 aa6.16□□□□□ -1.42
H3F3A-201ENST00000366813 C1orf226A1L170 272 aa6.16□□□□□ -1.42
H3F3A-201ENST00000366813 ABCD4O14678 606 aa6.16□□□□□ -1.42
H3F3A-201ENST00000366813 TP53I11O14683 189 aa6.16□□□□□ -1.42
H3F3A-201ENST00000366813 SCAMP2O15127 329 aaKnown RBP6.16□□□□□ -1.42
H3F3A-201ENST00000366813 LDB3O75112 727 aa6.16□□□□□ -1.42
H3F3A-201ENST00000366813 AQP8O94778 261 aa6.16□□□□□ -1.42
H3F3A-201ENST00000366813 PROSCO94903 275 aa6.16□□□□□ -1.42
H3F3A-201ENST00000366813 CATP04040 527 aaKnown RBP6.16□□□□□ -1.42
H3F3A-201ENST00000366813 HSP90AA1P07900 732 aaKnown RBP6.16□□□□□ -1.42
H3F3A-201ENST00000366813 GABRB1P18505 474 aa6.16□□□□□ -1.42
H3F3A-201ENST00000366813 PSMB1P20618 241 aaKnown RBP6.16□□□□□ -1.42
H3F3A-201ENST00000366813 MDKP21741 143 aaPredicted RBP6.16□□□□□ -1.42
H3F3A-201ENST00000366813 PCMT1P22061 227 aa6.16□□□□□ -1.42
H3F3A-201ENST00000366813 PSMA3P25788 255 aa6.16□□□□□ -1.42
H3F3A-201ENST00000366813 IMPA1P29218 277 aa6.16□□□□□ -1.42
H3F3A-201ENST00000366813 NR2C2P49116 596 aa6.16□□□□□ -1.42
H3F3A-201ENST00000366813 TBPL1P62380 186 aa6.16□□□□□ -1.42
H3F3A-201ENST00000366813 RGS1Q08116 209 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms