RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 SLC9A3R2Q15599 337 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 VPS26BQ4G0F5 336 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 UNC50Q53HI1 259 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 SPIN4Q56A73 249 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 KLF17Q5JT82 389 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 NKAPLQ5M9Q1 402 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 AVPI1Q5T686 147 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 IKBIPQ70UQ0 350 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 LRP11Q86VZ4 500 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 NANPQ8TBE9 248 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 PIGXQ8TBF5 258 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 ZNF385AQ96PM9 386 aaKnown RBP7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 CCDC106Q9BWC9 280 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 C1QTNF3Q9BXJ4 246 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 SHCBP1LQ9BZQ2 653 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 VPS11Q9H270 941 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 HHATLQ9HCP6 504 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 DYNLRB1Q9NP97 96 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 MIEF1Q9NQG6 463 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 CTPS2Q9NRF8 586 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 UPB1Q9UBR1 384 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 POLR3HQ9Y535 204 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 EPPK1P58107 5090 aaKnown RBP7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 ARPC4-TTLL3A0A0A6YYG9 625 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 A0A0G2JMP0 313 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 A0A0X1KG70 313 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 OR6C65A6NJZ3 312 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 VGLL3A8MV65 326 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 GTPBP1O00178 669 aaKnown RBP7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 ULK1O75385 1050 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 PMS2P2O95744 297 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 IGKV3-15P01624 115 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 ALOX5P09917 674 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 TFPIP10646 304 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 IMPDH2P12268 514 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 ACHEP22303 614 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 NOS3P29474 1203 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 TYK2P29597 1187 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 SERPINB4P48594 390 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 CCR4P51679 360 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 FOXA1P55317 472 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 CSNK2A1P68400 391 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 POU6F2P78424 691 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 MYBPC1Q00872 1141 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 CLCQ05315 142 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 ASPHD2Q6ICH7 369 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 ACSM5Q6NUN0 579 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 KLHL24Q6TFL4 600 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 SZRD1Q7Z422 152 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 TMCO5AQ8N6Q1 288 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 OR4M2Q8NGB6 313 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 OR4F15Q8NGB8 312 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 RDH5Q92781 318 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 AURKBQ96GD4 344 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 MS4A4EQ96PG1 132 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 CITED1Q99966 193 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 KRTAP17-1Q9BYP8 105 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 MMP27Q9H306 513 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 C7orf69Q9H7B7 122 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 NTN4Q9HB63 628 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 SLC52A3Q9NQ40 469 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 SIRT3Q9NTG7 399 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 ACER3Q9NUN7 267 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 REV1Q9UBZ9 1251 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 SNX12Q9UMY4 172 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 DTNAQ9Y4J8 743 aa7.25□□□□□ -1.25
HMGB1P39-201ENST00000366304 ARHGAP32A7KAX9 2087 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 CCDC151A5D8V7 595 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 J3QLI3 93 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 PDPK1O15530 556 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 ZNF264O43296 627 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 TSPAN15O95858 294 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 IGHV2-5P01817 119 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 KRT6AP02538 564 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 KRT6BP04259 564 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 HMGN2P05204 90 aaKnown RBP7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 ERCC1P07992 297 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 UBL4AP11441 157 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 CCNA2P20248 432 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 FRKP42685 505 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 MAGEA12P43365 314 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 KRT6CP48668 564 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 ATP12AP54707 1039 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 TMEM33P57088 247 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 OR2B6P58173 313 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 CBX1P83916 185 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 GUCY2DQ02846 1103 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 TGFBR3Q03167 851 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 MVKQ03426 396 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 BAMBIQ13145 260 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 LASP1Q14847 261 aaKnown RBP7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 TSNAXIP1Q2TAA8 658 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 DCST2Q5T1A1 773 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 PDZK1Q5T2W1 519 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 DCAF12L2Q5VW00 463 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 KRT80Q6KB66 452 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 KLC3Q6P597 504 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 GPRIN3Q6ZVF9 776 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 JAZF1Q86VZ6 243 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 ADGRG3Q86Y34 549 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms