RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 HIST1H2ABP04908 130 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 TSPAN19P0C672 248 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 ASAH2BP0C7U1 165 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 ITGA3P26006 1051 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 TTKP33981 857 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 MVKQ03426 396 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 MFSD13AQ14CX5 517 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 RSPO4Q2I0M5 234 aaPredicted RBP12.79□□□□□ -0.36
EIF3F-201ENST00000309828 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.79□□□□□ -0.361e-7■■■□□ 18.2
EIF3F-201ENST00000309828 FAM69AQ5T7M9 428 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 PRAMEF20Q5VT98 475 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 C1orf140Q5VVS0 124 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 ARHGAP11AQ6P4F7 1023 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 ARSKQ6UWY0 536 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 THSD4Q6ZMP0 1018 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 KCTD8Q6ZWB6 473 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 HIST3H2AQ7L7L0 130 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 MAMDC2Q7Z304 686 aaPredicted RBP12.79□□□□□ -0.36
EIF3F-201ENST00000309828 GGHQ92820 318 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 HIST1H2ACQ93077 130 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 RFKQ969G6 155 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 DDIT4LQ96D03 193 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 KTI12Q96EK9 354 aaPredicted RBP12.79□□□□□ -0.36
EIF3F-201ENST00000309828 SIGLEC11Q96RL6 698 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 TUBA1CQ9BQE3 449 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 COPS4Q9BT78 406 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 POTEKPQ9BYX7 375 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 PROK2Q9HC23 129 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 TIMMDC1Q9NPL8 285 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 CMC2Q9NRP2 79 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 CHRNA9Q9UGM1 479 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 SPTBN4Q9H254 2564 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 HEATR5AQ86XA9 2040 aa12.79□□□□□ -0.36
EIF3F-201ENST00000309828 WDR87Q6ZQQ6 2873 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 IMPA2O14732 288 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 ARPC3O15145 178 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 PRODHO43272 600 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 TRIM3O75382 744 aaPredicted RBP12.78□□□□□ -0.36
EIF3F-201ENST00000309828 IFNGP01579 166 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 CDK1P06493 297 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 HTR1AP08908 422 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 PEPDP12955 493 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 APEHP13798 732 aaKnown RBP12.78□□□□□ -0.36
EIF3F-201ENST00000309828 HK1P19367 917 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 CCNA2P20248 432 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 SLC15A1P46059 708 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 MASP1P48740 699 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 CLK1P49759 484 aaKnown RBP12.78□□□□□ -0.36
EIF3F-201ENST00000309828 DSCR4P56555 118 aaPredicted RBP12.78□□□□□ -0.36
EIF3F-201ENST00000309828 FOXF1Q12946 379 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 TBC1D25Q3MII6 688 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 GLYR1Q49A26 553 aaPredicted RBP12.78□□□□□ -0.36
EIF3F-201ENST00000309828 NADK2Q4G0N4 442 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 SYT14P1Q58G82 188 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 ZNF468Q5VIY5 522 aaPredicted RBP12.78□□□□□ -0.36
EIF3F-201ENST00000309828 TIGD3Q6B0B8 471 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 BORAQ6PGQ7 559 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 AHSA2Q719I0 299 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 LRRC17Q8N6Y2 441 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 OR1J4Q8NGS1 313 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 SLC25A43Q8WUT9 341 aaPredicted RBP12.78□□□□□ -0.36
EIF3F-201ENST00000309828 TAAR8Q969N4 342 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 LRR1Q96L50 414 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 ZNF582Q96NG8 517 aaPredicted RBP12.78□□□□□ -0.36
EIF3F-201ENST00000309828 MOGAT1Q96PD6 335 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 PTDSS2Q9BVG9 487 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 ENKD1Q9H0I2 346 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 DNAJC27Q9NZQ0 273 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 ERVK-18Q9QC07 812 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 KLHL21Q9UJP4 597 aa12.78□□□□□ -0.36
EIF3F-201ENST00000309828 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.78□□□□□ -0.36
EIF3F-201ENST00000309828 RIIAD1A6NNX1 92 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 FZD7O75084 574 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 CBR3O75828 277 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 UQCRC1P31930 480 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 RPL4P36578 427 aaKnown RBP12.77□□□□□ -0.37
EIF3F-201ENST00000309828 RPS5P46782 204 aaKnown RBP12.77□□□□□ -0.37
EIF3F-201ENST00000309828 GTF2A1P52655 376 aaPredicted RBP12.77□□□□□ -0.37
EIF3F-201ENST00000309828 NUDT6P53370 316 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 LTBQ06643 244 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 SELENBP1Q13228 472 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 TMED1Q13445 227 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 KLHL22Q53GT1 634 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 AADACL4Q5VUY2 407 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 NXNL2Q5VZ03 156 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 POMZP3Q6PJE2 187 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 NANOGNBQ7Z5D8 188 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 GID4Q8IVV7 300 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 GTPBP8Q8N3Z3 284 aaPredicted RBP12.77□□□□□ -0.37
EIF3F-201ENST00000309828 GALNT16Q8N428 558 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 STX19Q8N4C7 294 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 PSD4Q8NDX1 1056 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 ANKK1Q8NFD2 765 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 MFSD8Q8NHS3 518 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 C9orf43Q8TAL5 461 aaPredicted RBP12.77□□□□□ -0.37
EIF3F-201ENST00000309828 POC1BQ8TC44 478 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 UTP23Q9BRU9 249 aaKnown RBP12.77□□□□□ -0.37
EIF3F-201ENST00000309828 CCDC90BQ9GZT6 254 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 NRIP3Q9NQ35 241 aa12.77□□□□□ -0.37
EIF3F-201ENST00000309828 MRPS18AQ9NVS2 196 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms