RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 TACR3P29371 465 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 RGS6P49758 472 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 TMED1Q13445 227 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 SPHARQ15513 63 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 MED22Q15528 200 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 ISXQ2M1V0 245 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 FAM69BQ5VUD6 431 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 PLBD1Q6P4A8 553 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 RAB11FIP2Q7L804 512 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 LRRC17Q8N6Y2 441 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 BBS1Q8NFJ9 593 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 B4GALNT2Q8NHY0 566 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 THAP3Q8WTV1 239 aaPredicted RBP10.81□□□□□ -0.68
TRIM40-205ENST00000307859 TMCO6Q96DC7 493 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 LIN37Q96GY3 246 aaPredicted RBP10.81□□□□□ -0.68
TRIM40-205ENST00000307859 IMMP1LQ96LU5 166 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 OPALINQ96PE5 141 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 GPX7Q96SL4 187 aaPredicted RBP10.81□□□□□ -0.68
TRIM40-205ENST00000307859 CDC6Q99741 560 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 DDA1Q9BW61 102 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 JAM3Q9BX67 310 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 MMP25Q9NPA2 562 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 TIMMDC1Q9NPL8 285 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 DKK4Q9UBT3 224 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 EXOSC1Q9Y3B2 195 aaKnown RBP10.81□□□□□ -0.68
TRIM40-205ENST00000307859 PCDHGB6Q9Y5F9 930 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 HS3ST3B1Q9Y662 390 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 TMEM129A0AVI4 362 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 FAM183AA6NL82 134 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 RIIAD1A6NNX1 92 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 LRRN3E7EW58 273 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 M0R3G1 203 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 SOCS6O14544 535 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 MYL12BO14950 172 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 STK17BO94768 372 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 DKK1O94907 266 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 DLGAP3O95886 979 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 IGHA1P01876 353 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 SCG5P05408 212 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 CD63P08962 238 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 MYL12AP19105 171 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 HK1P19367 917 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 GADD45AP24522 165 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 ITPKBP27987 946 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 TMED10P49755 219 aaKnown RBP10.8□□□□□ -0.68
TRIM40-205ENST00000307859 ETV1P50549 477 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 SUMO3P55854 103 aaPredicted RBP10.8□□□□□ -0.68
TRIM40-205ENST00000307859 TOMM34Q15785 309 aaPredicted RBP10.8□□□□□ -0.68
TRIM40-205ENST00000307859 EXT1Q16394 746 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 ANKDD1AQ495B1 522 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 SLC35F1Q5T1Q4 408 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 ARMC4Q5T2S8 1044 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 DPY19L2P2Q6ZN68 376 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 SLC22A8Q8TCC7 542 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 GPR119Q8TDV5 335 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 DEPDC7Q96QD5 511 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 TAAR9Q96RI9 348 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 H2AFY2Q9P0M6 372 aaPredicted RBP10.8□□□□□ -0.68
TRIM40-205ENST00000307859 OSGIN1Q9UJX0 560 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 HIF3AQ9Y2N7 669 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 SMG1Q96Q15 3661 aaKnown RBP10.8□□□□□ -0.68
TRIM40-205ENST00000307859 NBEAQ8NFP9 2946 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 CCDC182A6NF36 153 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 MCIDASD6RGH6 385 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 PRR23D1E9PI22 279 aaPredicted RBP10.8□□□□□ -0.68
TRIM40-205ENST00000307859 J3QRE1 110 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 CCRL2O00421 344 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 PLD2O14939 933 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 ARPC3O15145 178 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 C1QL1O75973 258 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 APOL3O95236 402 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 IFNGP01579 166 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 IGHEP01854 428 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 FBXO45P0C2W1 286 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 TSPAN19P0C672 248 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 ASAH2BP0C7U1 165 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 PRR23D2P0DMB1 279 aaPredicted RBP10.8□□□□□ -0.68
TRIM40-205ENST00000307859 GP1BBP13224 206 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 ZNF3P17036 446 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 SLC2A5P22732 501 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 FOLR3P41439 243 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 DLX5P56178 289 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 PRPS1P60891 318 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 C17orf67Q0P5P2 114 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 MLLT11Q13015 90 aaPredicted RBP10.8□□□□□ -0.68
TRIM40-205ENST00000307859 ITGADQ13349 1161 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 C1DQ13901 141 aaKnown RBP10.8□□□□□ -0.68
TRIM40-205ENST00000307859 QPRTQ15274 297 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 SSX1Q16384 188 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 BTBD16Q32M84 506 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 PAQR6Q6TCH4 344 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 MEPCEQ7L2J0 689 aaKnown RBP10.8□□□□□ -0.68
TRIM40-205ENST00000307859 GRINAQ7Z429 371 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 ATCAYQ86WG3 371 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 SLC15A4Q8N697 577 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 LRRC75AQ8NAA5 344 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 OR5M3Q8NGP4 307 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 DUSP19Q8WTR2 217 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 RPL3LQ92901 407 aaKnown RBP10.8□□□□□ -0.68
TRIM40-205ENST00000307859 PTP4A1Q93096 173 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms