RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PFDN1O60925 122 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 ABCD3P28288 659 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 RPS19P39019 145 aaKnown RBP8.34□□□□□ -1.07
PDPN-201ENST00000294489 NRG3P56975 720 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 E2F1Q01094 437 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 ZNF45Q02386 682 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 POU4F2Q12837 409 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 ZNF791Q3KP31 576 aaPredicted RBP8.34□□□□□ -1.07
PDPN-201ENST00000294489 CRTC2Q53ET0 693 aaPredicted RBP8.34□□□□□ -1.07
PDPN-201ENST00000294489 ZNF362Q5T0B9 420 aaPredicted RBP8.34□□□□□ -1.07
PDPN-201ENST00000294489 ZNF322Q6U7Q0 402 aaPredicted RBP8.34□□□□□ -1.07
PDPN-201ENST00000294489 Q6ZNX1 250 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 LRRC17Q8N6Y2 441 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 OR10H4Q8NGA5 316 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 OR52E2Q8NGJ4 325 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 SPRYD4Q8WW59 207 aaPredicted RBP8.34□□□□□ -1.07
PDPN-201ENST00000294489 ATOH1Q92858 354 aaPredicted RBP8.34□□□□□ -1.07
PDPN-201ENST00000294489 PMEPA1Q969W9 287 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 RNF31Q96EP0 1072 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 LIN37Q96GY3 246 aaPredicted RBP8.34□□□□□ -1.07
PDPN-201ENST00000294489 CEP19Q96LK0 163 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 COQ7Q99807 217 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 RERGLQ9H628 205 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 CHRNA9Q9UGM1 479 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 SEC16AO15027 2179 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 CPAMD8Q8IZJ3 1885 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 HEATR5AQ86XA9 2040 aa8.34□□□□□ -1.07
PDPN-201ENST00000294489 A0A075B6Q4 140 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 OIP5O43482 229 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 EIF4E2O60573 245 aaKnown RBP8.34□□□□□ -1.08
PDPN-201ENST00000294489 KLF7O75840 302 aaPredicted RBP8.34□□□□□ -1.08
PDPN-201ENST00000294489 DKK1O94907 266 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 IL1AP01583 271 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 NAGAP17050 411 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 CELP19835 753 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 ITPKBP27987 946 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 DLX5P56178 289 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 FOXL2P58012 376 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 INSM1Q01101 510 aaPredicted RBP8.34□□□□□ -1.08
PDPN-201ENST00000294489 BDH1Q02338 343 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 SPANXN2Q5MJ10 180 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 C22orf42Q6IC83 251 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 CHPT1Q8WUD6 406 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 TRMT61AQ96FX7 289 aaKnown RBP8.34□□□□□ -1.08
PDPN-201ENST00000294489 COX4I2Q96KJ9 171 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 ARPC5LQ9BPX5 153 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 ZNF649Q9BS31 505 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 ZPBPQ9BS86 351 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 ALG8Q9BVK2 526 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 DDA1Q9BW61 102 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 ZNF700Q9H0M5 742 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 AKIRIN1Q9H9L7 192 aaPredicted RBP8.34□□□□□ -1.08
PDPN-201ENST00000294489 NANSQ9NR45 359 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 SNTG1Q9NSN8 517 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 RYDENQ9NUL5 291 aaKnown RBP8.34□□□□□ -1.08
PDPN-201ENST00000294489 HAO2Q9NYQ3 351 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 IER3IP1Q9Y5U9 82 aa8.34□□□□□ -1.08
PDPN-201ENST00000294489 DMDP11532 3685 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 IGKV1D-42A0A075B6H8 117 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 ZC3H12DA2A288 527 aaKnown RBP8.33□□□□□ -1.08
PDPN-201ENST00000294489 MCIDASD6RGH6 385 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 LRRN3E7EW58 273 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 SULT1C4O75897 302 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 CDRT1O95170 752 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 NUDT14O95848 222 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 HLA-DPB1P04440 258 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 UMODP07911 640 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 OCM2P0CE71 109 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 OCMP0CE72 109 aaPredicted RBP8.33□□□□□ -1.08
PDPN-201ENST00000294489 CD79BP40259 229 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 RPS25P62851 125 aaKnown RBP8.33□□□□□ -1.08
PDPN-201ENST00000294489 ZNF117Q03924 483 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 LGALS3BPQ08380 585 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 ATP1A4Q13733 1029 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 LYPD8Q6UX82 237 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 DCDC5Q6ZRR9 648 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 OR4K13Q8NH42 304 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 LIPHQ8WWY8 451 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 HGDQ93099 445 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 KISS1RQ969F8 398 aaPredicted RBP8.33□□□□□ -1.08
PDPN-201ENST00000294489 ABTB1Q969K4 478 aaPredicted RBP8.33□□□□□ -1.08
PDPN-201ENST00000294489 TBX5Q99593 518 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 MESP1Q9BRJ9 268 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 RTN4RQ9BZR6 473 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 NDEL1Q9GZM8 345 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 ADAM19Q9H013 955 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 BABAM2Q9NXR7 383 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 SLC39A1Q9NY26 324 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 C19orf25Q9UFG5 118 aaPredicted RBP8.33□□□□□ -1.08
PDPN-201ENST00000294489 SF3B6Q9Y3B4 125 aaKnown RBP8.33□□□□□ -1.08
PDPN-201ENST00000294489 CCDC182A6NF36 153 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 PRR33A8MZF0 331 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 ARPC3O15145 178 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 IDH3BO43837 385 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 DLGAP3O95886 979 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 SBK2P0C263 348 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 HIST1H1CP16403 213 aaKnown RBP8.33□□□□□ -1.08
PDPN-201ENST00000294489 PGCP20142 388 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 TACR3P29371 465 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 SLC26A5P58743 744 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms