RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ZNF808Q8N4W9 903 aaPredicted RBP15.11■□□□□ 0.01
SDCBP-201ENST00000260130 RAB2BQ8WUD1 216 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 CNOT9Q92600 299 aaKnown RBP15.11■□□□□ 0.01
SDCBP-201ENST00000260130 ZNF524Q96C55 264 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 BLOC1S6Q9UL45 172 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 IFT52Q9Y366 437 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 THBS1P07996 1170 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 ZNF12P17014 697 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 PRKCAP17252 672 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 AGAP20933 346 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 TPD52P55327 224 aaPredicted RBP15.1■□□□□ 0.01
SDCBP-201ENST00000260130 RBBP4Q09028 425 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 FOXF1Q12946 379 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 SCARB2Q14108 478 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 QPRTQ15274 297 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 NSUN5P2Q63ZY6 315 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 MEIOBQ8N635 442 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 OR52E4Q8NGH9 312 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 FIG4Q92562 907 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 POP5Q969H6 163 aaKnown RBP15.1■□□□□ 0.01
SDCBP-201ENST00000260130 TRIB1Q96RU8 372 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 NAA50Q9GZZ1 169 aaKnown RBP15.1■□□□□ 0.01
SDCBP-201ENST00000260130 CALHM2Q9HA72 323 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 PALMDQ9NP74 551 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 DNAJB12Q9NXW2 375 aaKnown RBP15.1■□□□□ 0.01
SDCBP-201ENST00000260130 COQ3Q9NZJ6 369 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 ZNF443Q9Y2A4 671 aaPredicted RBP15.1■□□□□ 0.01
SDCBP-201ENST00000260130 MED12Q93074 2177 aa15.1■□□□□ 0.01
SDCBP-201ENST00000260130 DIDO1Q9BTC0 2240 aaKnown RBP15.1■□□□□ 0.01
SDCBP-201ENST00000260130 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 HOXB6P17509 224 aaKnown RBP15.09■□□□□ 0.01
SDCBP-201ENST00000260130 RYKP34925 604 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 POLR2IP36954 125 aaKnown RBP15.09■□□□□ 0.01
SDCBP-201ENST00000260130 SUCLG1P53597 346 aaKnown RBP15.09■□□□□ 0.01
SDCBP-201ENST00000260130 CLDN15P56746 228 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 CLDN20P56880 219 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 GABARAPL2P60520 117 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 RAC1P63000 192 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 SLC25A53Q5H9E4 307 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 SERPINA11Q86U17 422 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 PTOV1Q86YD1 416 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 LACC1Q8IV20 430 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 C11orf65Q8NCR3 313 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 OR10Q1Q8NGQ4 319 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 OR10A6Q8NH74 314 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 GIPC3Q8TF64 312 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 SMPDL3BQ92485 455 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 SLC47A1Q96FL8 570 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 MRGPRX4Q96LA9 322 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 RBM4BQ9BQ04 359 aaKnown RBP15.09■□□□□ 0.01
SDCBP-201ENST00000260130 RBM4Q9BWF3 364 aaKnown RBP15.09■□□□□ 0.01
SDCBP-201ENST00000260130 TOR3AQ9H497 397 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 RLIMQ9NVW2 624 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 USE1Q9NZ43 259 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 CDHR4A6H8M9 788 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 CD8B2A6NJW9 211 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 KDM4EB2RXH2 506 aaPredicted RBP15.09■□□□□ 0.01
SDCBP-201ENST00000260130 ETV2O00321 342 aaPredicted RBP15.09■□□□□ 0.01
SDCBP-201ENST00000260130 SEC14L5O43304 696 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 BCL10O95999 233 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 CST1P01037 141 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 INHBBP09529 407 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 CRHBPP24387 322 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 SLC6A8P48029 635 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 EEF1A1P68104 462 aaKnown RBP15.09■□□□□ 0.01
SDCBP-201ENST00000260130 TOP3AQ13472 1001 aaPredicted RBP15.09■□□□□ 0.01
SDCBP-201ENST00000260130 ZSWIM7Q19AV6 140 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 ZNF311Q5JNZ3 666 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 ZNF836Q6ZNA1 936 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 SEM1Q6ZVN7 128 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 KRT73Q86Y46 540 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 TMEM234Q8WY98 164 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 ST8SIA1Q92185 356 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 OSBPL10Q9BXB5 764 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 ARMC7Q9H6L4 198 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 FAM118AQ9NWS6 357 aa15.09■□□□□ 0.01
SDCBP-201ENST00000260130 H0YC42 278 aa15.08■□□□□ 0.01
SDCBP-201ENST00000260130 GNGT2O14610 69 aa15.08■□□□□ 0.01
SDCBP-201ENST00000260130 NTN1O95631 604 aa15.08■□□□□ 0.01
SDCBP-201ENST00000260130 CHMP1BQ7LBR1 199 aa15.08■□□□□ 0.01
SDCBP-201ENST00000260130 ADGRE4PQ86SQ3 457 aa15.08■□□□□ 0.01
SDCBP-201ENST00000260130 GRAMD2AQ8IUY3 354 aa15.08■□□□□ 0.01
SDCBP-201ENST00000260130 ZNF563Q8TA94 476 aa15.08■□□□□ 0.01
SDCBP-201ENST00000260130 ITFG2Q969R8 447 aa15.08■□□□□ 0.01
SDCBP-201ENST00000260130 PLEKHA8Q96JA3 519 aa15.08■□□□□ 0.01
SDCBP-201ENST00000260130 COX4I2Q96KJ9 171 aa15.08■□□□□ 0.01
SDCBP-201ENST00000260130 UCN2Q96RP3 112 aa15.08■□□□□ 0.01
SDCBP-201ENST00000260130 SPATA5L1Q9BVQ7 753 aa15.08■□□□□ 0.01
SDCBP-201ENST00000260130 SPATA9Q9BWV2 254 aa15.08■□□□□ 0.01
SDCBP-201ENST00000260130 RNF6Q9Y252 685 aa15.08■□□□□ 0.01
SDCBP-201ENST00000260130 USP9YO00507 2555 aaPredicted RBP15.08■□□□□ 0
SDCBP-201ENST00000260130 ELOVL7A1L3X0 281 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 CLCA1A8K7I4 914 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 EFNA2O43921 213 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 ADAM11O75078 769 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 IL11P20809 199 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 CD247P20963 164 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 TIMP3P35625 211 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 GZMMP51124 257 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 RIPPLY2Q5TAB7 128 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms