RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ZNF136P52737 540 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 CEBPEQ15744 281 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 ST3GAL2Q16842 350 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 GSG1Q2KHT4 349 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 GPR139Q6DWJ6 353 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 FAM111BQ6SJ93 734 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 SLC16A11Q8NCK7 471 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 DACT3Q96B18 629 aaPredicted RBP15.62■□□□□ 0.09
FOXA1-201ENST00000250448 HS6ST2Q96MM7 605 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 ZNF223Q9UK11 482 aaPredicted RBP15.62■□□□□ 0.09
FOXA1-201ENST00000250448 RPS10-NUDT3A0A1W2PQS6 291 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 SLC22A31A6NKX4 558 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 J3QLW9 94 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 GPR171O14626 319 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 BCAT2O15382 392 aaPredicted RBP15.62■□□□□ 0.09
FOXA1-201ENST00000250448 DNAJB6O75190 326 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 TSPAN9O75954 239 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 ZNF19P17023 458 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 ACVR1BP36896 505 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 DHPSP49366 369 aaPredicted RBP15.62■□□□□ 0.09
FOXA1-201ENST00000250448 MMP15P51511 669 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 SLC16A1P53985 500 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 FGFBP1Q14512 234 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 MFSD12Q6NUT3 480 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 LNX2Q8N448 690 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 PFN4Q8NHR9 129 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 MS4A3Q96HJ5 214 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 PGLYRP3Q96LB9 341 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 TMEM74BQ9NUR3 256 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 WDR45Q9Y484 360 aa15.62■□□□□ 0.09
FOXA1-201ENST00000250448 OR5K4A6NMS3 321 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 C2orf74A8MZ97 194 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 PRR23D1E9PI22 279 aaPredicted RBP15.61■□□□□ 0.09
FOXA1-201ENST00000250448 SCO1O75880 301 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 ZNF888P0CJ79 500 aaPredicted RBP15.61■□□□□ 0.09
FOXA1-201ENST00000250448 PRR23D2P0DMB1 279 aaPredicted RBP15.61■□□□□ 0.09
FOXA1-201ENST00000250448 BMP7P18075 431 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 DNASE1P24855 282 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 ZNF81P51508 661 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 BTN3A2P78410 334 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 SNTA1Q13424 505 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 EXOSC2Q13868 293 aaKnown RBP15.61■□□□□ 0.09
FOXA1-201ENST00000250448 LGALSLQ3ZCW2 172 aaPredicted RBP15.61■□□□□ 0.09
FOXA1-201ENST00000250448 IGSF11Q5DX21 431 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 RPTNQ6XPR3 784 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 BTN2A1Q7KYR7 527 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 FGD2Q7Z6J4 655 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 COMMD7Q86VX2 200 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 CCDC120Q96HB5 630 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 ZFP3Q96NJ6 502 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 C7orf50Q9BRJ6 194 aaKnown RBP15.61■□□□□ 0.09
FOXA1-201ENST00000250448 CLEC4MQ9H2X3 399 aaPredicted RBP15.61■□□□□ 0.09
FOXA1-201ENST00000250448 MRPS2Q9Y399 296 aaKnown RBP15.61■□□□□ 0.09
FOXA1-201ENST00000250448 NPFFR2Q9Y5X5 522 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 CACNA1EQ15878 2313 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 ARID1BQ8NFD5 2236 aaPredicted RBP15.61■□□□□ 0.09
FOXA1-201ENST00000250448 TRAPPC13A5PLN9 417 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 CDHR4A6H8M9 788 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 FAM86C2PA6NEL3 165 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 ZNF860A6NHJ4 632 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 DUXAA6NLW8 204 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 LRRN3E7EW58 273 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 ZNF593O00488 134 aaPredicted RBP15.61■□□□□ 0.09
FOXA1-201ENST00000250448 IFNA7P01567 189 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 RAG2P55895 527 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 PITPNAQ00169 270 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 CAMK2DQ13557 499 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 ACSM3Q53FZ2 586 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 WDR88Q6ZMY6 472 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 GLRX5Q86SX6 157 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 RANBP3LQ86VV4 465 aaPredicted RBP15.61■□□□□ 0.09
FOXA1-201ENST00000250448 HAVCR2Q8TDQ0 301 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 MS4A4EQ96PG1 132 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 OR2A5Q96R48 311 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 OR51V1Q9H2C8 321 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 LRRN3Q9H3W5 708 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 MTHFD2LQ9H903 347 aaPredicted RBP15.61■□□□□ 0.09
FOXA1-201ENST00000250448 DLL4Q9NR61 685 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 CMC2Q9NRP2 79 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 DCAF16Q9NXF7 216 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 CENPVL1A0A0U1RR11 272 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 OR5K3A6NET4 321 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 MT-ND4P03905 459 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 SNRPBP14678 240 aaKnown RBP15.61■□□□□ 0.09
FOXA1-201ENST00000250448 ST6GAL1P15907 406 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 SSTR2P30874 369 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 ZNF85Q03923 595 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 EIPR1Q53HC9 387 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 CLLU1Q5K131 121 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 ASPGQ86U10 573 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 BEST4Q8NFU0 473 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 OR7G2Q8NG99 324 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 OR13C5Q8NGS8 318 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 OR51Q1Q8NH59 317 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 NXPE2Q96DL1 559 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 TEAD3Q99594 435 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 FAM60AQ9NP50 221 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 C20orf141Q9NUB4 165 aa15.61■□□□□ 0.09
FOXA1-201ENST00000250448 MRPS7Q9Y2R9 242 aaKnown RBP15.61■□□□□ 0.09
FOXA1-201ENST00000250448 H3BUI4 141 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms