RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 CCDC32Q9BV29 185 aa15.5■□□□□ 0.07
CDKN1A-201ENST00000244741 WWTR1Q9GZV5 400 aa15.5■□□□□ 0.07
CDKN1A-201ENST00000244741 TRIM45Q9H8W5 580 aaPredicted RBP15.5■□□□□ 0.07
CDKN1A-201ENST00000244741 IL20Q9NYY1 176 aa15.5■□□□□ 0.07
CDKN1A-201ENST00000244741 IL20RAQ9UHF4 553 aa15.5■□□□□ 0.07
CDKN1A-201ENST00000244741 PAIP2BQ9ULR5 123 aaKnown RBP15.5■□□□□ 0.07
CDKN1A-201ENST00000244741 TRAPPC4Q9Y296 219 aa15.5■□□□□ 0.07
CDKN1A-201ENST00000244741 SF3B6Q9Y3B4 125 aaKnown RBP15.5■□□□□ 0.07
CDKN1A-201ENST00000244741 OR10H1Q9Y4A9 318 aa15.5■□□□□ 0.07
CDKN1A-201ENST00000244741 V9GYH0 126 aa15.5■□□□□ 0.07
CDKN1A-201ENST00000244741 MED13Q9UHV7 2174 aa15.5■□□□□ 0.07
CDKN1A-201ENST00000244741 SNPHO15079 494 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 SURF4O15260 269 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 KLK10O43240 276 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 OR5F1O95221 314 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 AGR2O95994 175 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 NR0B1P51843 470 aaKnown RBP15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 PSPHP78330 225 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 Q0VFX4 171 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 TPBGQ13641 420 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 ZMAT1Q5H9K5 638 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 AADACL4Q5VUY2 407 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 SPATC1Q76KD6 591 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 SLC29A4Q7RTT9 530 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 PEX5LQ8IYB4 626 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 OR8H2Q8N162 312 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 ZSCAN1Q8NBB4 408 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 POGLUT1Q8NBL1 392 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 SLC25A46Q96AG3 418 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 PIGUQ9H490 435 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 PRODH2Q9UF12 536 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 SLC7A7Q9UM01 511 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 ZNF232Q9UNY5 417 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 EXOSC1Q9Y3B2 195 aaKnown RBP15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 URB1O60287 2271 aaKnown RBP15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 NPIPA5A0A0B4J1W7 369 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 IRGMA1A4Y4 181 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 NPIPA7E9PJI5 369 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 IGHEP01854 428 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 CYC1P08574 325 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 NPIPA8P0DM63 369 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 MAP3K8P41279 467 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 ZNF136P52737 540 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 TPTEP56180 551 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 DEFA1P59665 94 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 DEFA3P59666 94 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 EEF1A1P68104 462 aaKnown RBP15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 RUNX1T1Q06455 604 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 GPR68Q15743 365 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 MAPK14Q16539 360 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 HLA-DQA1Q5Y7H0 255 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 TMPRSS11AQ6ZMR5 421 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 ZAR1Q86SH2 424 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 LHFPL3Q86UP9 236 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 OR4F15Q8NGB8 312 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 ADAMTS17Q8TE56 1095 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 ADIPOR1Q96A54 375 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 C1GALT1C1Q96EU7 318 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 TM9SF2Q99805 663 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 SEMA4CQ9C0C4 833 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 ZZEF1O43149 2961 aa15.49■□□□□ 0.07
CDKN1A-201ENST00000244741 CDC42EP2O14613 210 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 SLC2A10O95528 541 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 IL1AP01583 271 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 IGKV1D-16P01601 117 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 PRG2P13727 222 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 CDH11P55287 796 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 CHAF1BQ13112 559 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 KRR1Q13601 381 aaKnown RBP15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 ZNF620Q6ZNG0 422 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 ZFP41Q8N8Y5 198 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 ZNF485Q8NCK3 441 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 C7orf57Q8NEG2 295 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 BBS1Q8NFJ9 593 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 EFHD2Q96C19 240 aaPredicted RBP15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 TXNDC15Q96J42 360 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 LMF2Q9BU23 707 aaKnown RBP15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 PRRG3Q9BZD7 231 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 PLEKHB1Q9UF11 243 aaPredicted RBP15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 TBC1D24Q9ULP9 559 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 BOD1L1Q8NFC6 3051 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 IQCMA0A1B0GVH7 501 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 TMEM200CA6NKL6 621 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 PEX12O00623 359 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 ZNF354AO60765 605 aaPredicted RBP15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 NKX2-2O95096 273 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 HNRNPA0Q13151 305 aaKnown RBP15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 ZNF79Q15937 498 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 PGGHGQ32M88 737 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 EXOSC6Q5RKV6 272 aaKnown RBP15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 DCST2Q5T1A1 773 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 RAB43Q86YS6 212 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 CELF2-AS1Q8N7Q2 184 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 PSD4Q8NDX1 1056 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 KCNE4Q8WWG9 221 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 WDFY2Q96P53 400 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 ARHGAP9Q9BRR9 750 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 DEFB126Q9BYW3 111 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 ISYNA1Q9NPH2 558 aa15.48■□□□□ 0.07
CDKN1A-201ENST00000244741 DUSP22Q9NRW4 184 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms