RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 GPR4P46093 362 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 CAPZA2P47755 286 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 ZNF117Q03924 483 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 RAB40BQ12829 278 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 CHAF1BQ13112 559 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 CD226Q15762 336 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 IGFBP7Q16270 282 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 UBE2UQ5VVX9 321 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 JMJD6Q6NYC1 403 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-201ENST00000238688 WDR88Q6ZMY6 472 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 SHISA6Q6ZSJ9 500 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 GRINAQ7Z429 371 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 OAFQ86UD1 273 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 KIF18BQ86Y91 864 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 RAB43Q86YS6 212 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 STX19Q8N4C7 294 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 TMCO5AQ8N6Q1 288 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 B4GALNT2Q8NHY0 566 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 ZNF563Q8TA94 476 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 STK35Q8TDR2 534 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 GRHL3Q8TE85 626 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 HGDQ93099 445 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 SPACA9Q96E40 222 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-201ENST00000238688 MYCBPQ99417 103 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-201ENST00000238688 GPA33Q99795 319 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 PRR14Q9BWN1 585 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 OR52D1Q9H346 318 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 UBQLN3Q9H347 655 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 MEPEQ9NQ76 525 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-201ENST00000238688 PTTG2Q9NZH5 202 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 CARD8Q9Y2G2 431 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 NTNG1Q9Y2I2 539 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 ESPL1Q14674 2120 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 TMEM200CA6NKL6 621 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 KDM4EB2RXH2 506 aaPredicted RBP12□□□□□ -0.49
SLIRP-201ENST00000238688 ARPC3O15145 178 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 SURF4O15260 269 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 OR2T1O43869 369 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 MAN1A2O60476 641 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 TRMUO75648 421 aaKnown RBP12□□□□□ -0.49
SLIRP-201ENST00000238688 NDUFB2O95178 105 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 PEPDP12955 493 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 POLR2HP52434 150 aaKnown RBP12□□□□□ -0.49
SLIRP-201ENST00000238688 RPS4XP62701 263 aaKnown RBP12□□□□□ -0.49
SLIRP-201ENST00000238688 FOXK1P85037 733 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 EMX1Q04741 257 aaPredicted RBP12□□□□□ -0.49
SLIRP-201ENST00000238688 KHDRBS1Q07666 443 aaKnown RBP eCLIP12□□□□□ -0.49
SLIRP-201ENST00000238688 RAB39AQ14964 217 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 BTBD16Q32M84 506 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 SYT14P1Q58G82 188 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 NXNL2Q5VZ03 156 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 SLC30A6Q6NXT4 461 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 APOOLQ6UXV4 268 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 DPY19L2P2Q6ZN68 376 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 AHSA2Q719I0 299 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 TCEANCQ8N8B7 351 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 OR11G2Q8NGC1 345 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 RNF217Q8TC41 542 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 THAP4Q8WY91 577 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 GGHQ92820 318 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 SGCZQ96LD1 299 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 LMF1Q96S06 567 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 JAM3Q9BX67 310 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 FKRPQ9H9S5 495 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 ACOT13Q9NPJ3 140 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 CMC2Q9NRP2 79 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 PAK1IP1Q9NWT1 392 aaPredicted RBP12□□□□□ -0.49
SLIRP-201ENST00000238688 TVP23BQ9NYZ1 205 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 KLHL21Q9UJP4 597 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 ZNF229Q9UJW7 825 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 CEPT1Q9Y6K0 416 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 HIVEP3Q5T1R4 2406 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 COL12A1Q99715 3063 aa12□□□□□ -0.49
SLIRP-201ENST00000238688 NAV2Q8IVL1 2488 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 IGHV3-20A0A0C4DH32 117 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 ANKRD33BA6NCL7 494 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 ARGFXA6NJG6 315 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 ENO4A6NNW6 628 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 MKRN2OSH3BPM6 223 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 BHLHE40O14503 412 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 SOCS6O14544 535 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 CDC42EP2O14613 210 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 IMPA2O14732 288 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 ADAM11O75078 769 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 CEACAM4O75871 244 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 OR7A10O76100 309 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 PAICSP22234 425 aaKnown RBP11.99□□□□□ -0.49
SLIRP-201ENST00000238688 CXCR1P25024 350 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 ACVR2AP27037 513 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 APOBEC1P41238 236 aaKnown RBP11.99□□□□□ -0.49
SLIRP-201ENST00000238688 CCR4P51679 360 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 SRSF1Q07955 248 aaKnown RBP eCLIP11.99□□□□□ -0.49
SLIRP-201ENST00000238688 CRYZQ08257 329 aaKnown RBP11.99□□□□□ -0.49
SLIRP-201ENST00000238688 ST3GAL4Q11206 333 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 POU4F2Q12837 409 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 KLRB1Q12918 225 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 PMS2P3Q13401 168 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 IRF3Q14653 427 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 SLC25A53Q5H9E4 307 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 EMC4Q5J8M3 183 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms