RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 GALNT16Q8N428 558 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 NEIL3Q8TAT5 605 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 ZNF337Q9Y3M9 751 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 IGHV5-51A0A0C4DH38 117 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 LRRC30A6NM36 301 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 KIR2DL3P43628 341 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 PFN3P60673 137 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 SPRED1Q7Z699 444 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 ST7LQ8TDW4 575 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 INTS12Q96CB8 462 aaKnown RBP12.72□□□□□ -0.37
SIX4-201ENST00000216513 TM4SF18Q96CE8 201 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 LYRM4Q9HD34 91 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 PTTG2Q9NZH5 202 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 SLC6A5Q9Y345 797 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 A0A0A6YYH2 397 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 A6NJ64 397 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 GNAO1P09471 354 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 PTGS2P35354 604 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 COL28A1Q2UY09 1125 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 FAM57BQ71RH2 274 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 ZNF285Q96NJ3 590 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 ZNF175Q9Y473 711 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 M0R036 132 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 ITGB2P05107 769 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 GTF2F2P13984 249 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 MEOX1P50221 254 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 CAV3P56539 151 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 CLDN15P56746 228 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 ZDHHC16Q969W1 377 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 SLC22A4Q9H015 551 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 TRGV5A0A0B4J1U4 118 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 TRABD2BA6NFA1 517 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 KIAA0513O60268 411 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 TUBG1P23258 451 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 OR1L3Q8NH93 324 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 ATOH8Q96SQ7 321 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 CRLF2Q9HC73 371 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 H7C1C5 153 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 LCN6P62502 163 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 HBA1P69905 142 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 HSD17B12Q53GQ0 312 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 SLC48A1Q6P1K1 146 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 SCCPDHQ8NBX0 429 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 TSPEARQ8WU66 669 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 LOXL4Q96JB6 756 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 MCM3APO60318 1980 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 SMCO3A2RU48 225 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 IGLV3-25P01717 112 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 AKR1C4P17516 323 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 S100A1P23297 94 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 AGFG1P52594 562 aaKnown RBP12.71□□□□□ -0.37
SIX4-201ENST00000216513 SSPNQ14714 243 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 RAB12Q6IQ22 244 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 MS4A6EQ96DS6 147 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 NARFLQ9H6Q4 476 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 OR2S2Q9NQN1 319 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 IGHV3-15A0A0B4J1V0 119 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 H0YIV9 168 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 SLC1A7O00341 560 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 TNFSF11O14788 317 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 ADAM23O75077 832 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 AKR7A3O95154 331 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 OXSR1O95747 527 aaPredicted RBP12.71□□□□□ -0.37
SIX4-201ENST00000216513 DRD5P21918 477 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 ETV4P43268 484 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 MEDAGQ5VYS4 303 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 CGB2Q6NT52 195 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 C6orf89Q6UWU4 347 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 PM20D2Q8IYS1 436 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 MORN4Q8NDC4 146 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 OR52A5Q9H2C5 316 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 DAPP1Q9UN19 280 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 MEMO1Q9Y316 297 aa12.71□□□□□ -0.37
SIX4-201ENST00000216513 KANTRA0A1W2PQU2 76 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 IFNA21P01568 189 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 SLC35F2Q8IXU6 374 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 BCORP1Q8N888 145 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 MFSD8Q8NHS3 518 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 FCGR1BQ92637 280 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 FAM46BQ96A09 425 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 MRGPRX3Q96LB0 322 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 ACSS1Q9NUB1 689 aaPredicted RBP12.71□□□□□ -0.38
SIX4-201ENST00000216513 PCDHGA7Q9Y5G6 932 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 SURF4O15260 269 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 HLA-DPB1P04440 258 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 PSMA6P60900 246 aaKnown RBP12.71□□□□□ -0.38
SIX4-201ENST00000216513 CDNFQ49AH0 187 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 THRSPQ92748 146 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 HDAC2Q92769 488 aaKnown RBP12.71□□□□□ -0.38
SIX4-201ENST00000216513 BIRC8Q96P09 236 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 SYT11Q9BT88 431 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 LHX6Q9UPM6 363 aa12.71□□□□□ -0.38
SIX4-201ENST00000216513 ANKRD31Q8N7Z5 1873 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 ANKRD12Q6UB98 2062 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 GFYI3L273 518 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 OR7A17O14581 309 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 POU2F2P09086 479 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 NUDT7P0C024 238 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 PIGAP37287 484 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 ACTA2P62736 377 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms