RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 SgtbQ8VD33 304 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Olfr536Q8VFE9 307 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Slc2a10Q8VHD6 536 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Dus3lQ91XI1 637 aaKnown RBP13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 MrgprgQ91ZB5 289 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Tram2Q924Z5 370 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 CutalQ9D1U5 156 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Adad2Q9D5P4 478 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Sec23bQ9D662 767 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Tnfrsf21Q9EPU5 655 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Sh2d3cQ9QZS8 854 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Padi1Q9Z185 662 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Upk1bQ9Z2C6 260 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Col5a1O88207 1838 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Spg11Q3UHA3 2430 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Olfr1303A2AVW1 312 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Aadacl2B2RWD2 401 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gm5407E9Q7Q1 248 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Zfp994J3QM38 661 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Sema6aO35464 1031 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Rad51dO55230 329 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 P18524 117 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Copz1P61924 177 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Tmem171Q4KL18 322 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Ppp2r2bQ6ZWR4 443 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gm21627Q810R0 219 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gpr68Q8BFQ3 365 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Cadm2Q8BLQ9 435 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Plekhm3Q8BM47 761 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Slc25a24Q8BMD8 475 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Nlgn3Q8BYM5 825 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Guf1Q8C3X4 651 aaKnown RBP13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Rab36Q8CAM5 267 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Lsm14aQ8K2F8 462 aaKnown RBP13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Pom121Q8K3Z9 1200 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 NotumQ8R116 503 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 HopxQ8R1H0 73 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Olfr729Q8VET4 323 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Olfr444Q8VFS6 310 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Olfr283Q8VGU2 309 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Olfr691Q8VGW5 322 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 2610042L04RikQ9D073 150 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 PacrglQ9D3X5 248 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Tex29Q9DA77 186 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Rtp4Q9ER80 249 aaKnown RBP13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Icam4Q9ERM2 262 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Rgs1Q9JL25 209 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Slc7a8Q9QXW9 531 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 ClcnkaQ9WUB7 687 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Ror2Q9Z138 944 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 NfkbiaQ9Z1E3 314 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Vmn1r10W4VSP8 311 aa13.36□□□□□ -0.27
Ercc1-201ENSMUST00000003645 SetxA2AKX3 2646 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Fam53aE9PV82 402 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gpr137cE9Q343 423 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Adam3F8VQ03 822 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Prdx4O08807 274 aaKnown RBP13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Rrm2P11157 390 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Nr4a1P12813 601 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Cpa3P15089 417 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gnb5P62881 395 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Btg2Q04211 158 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Bcl2l15Q08ED0 167 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Grxcr2Q3TYR5 254 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Sorbs2Q3UTJ2 1180 aaKnown RBP13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Ei24Q61070 340 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Ldoc1Q7TPY9 151 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Tas2r136Q7TQA8 305 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Kazald1Q8BJ66 313 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Slc30a6Q8BJM5 460 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Ctdsp2Q8BX07 270 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Fam120cQ8C3F2 1091 aaKnown RBP13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Snrnp27Q8K194 155 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Dlgap5Q8K4R9 808 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Olfr1423Q8VFV0 310 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Ubqln4Q99NB8 596 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Abcg5Q99PE8 652 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Tstd3Q9D0B5 157 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 DnlzQ9D113 177 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 PgdQ9DCD0 483 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Slc38a3Q9DCP2 505 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Mid2Q9QUS6 705 aa13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Map1bP14873 2464 aaKnown RBP13.35□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Slc25a25A2ASZ8 469 aa13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Vmn2r90E9PXJ8 863 aa13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Olfr376E9Q4M1 320 aa13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Ntn1O09118 604 aa13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 LynP25911 512 aa13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Bglap3P54615 95 aa13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Pdcd5P56812 126 aa13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Kcnab2P62482 367 aa13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Tas2r135Q7TQA9 312 aa13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Slitrk2Q810C0 846 aa13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Spata2lQ8BNN1 426 aa13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Fastkd3Q8BSN9 661 aa13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Rbm4Q8C7Q4 361 aaKnown RBP13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Q8K207 121 aa13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Klhl25Q8R2P1 589 aa13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Rbm4bQ8VE92 357 aaKnown RBP13.34□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Chrdl2Q8VEA6 426 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms