RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 NTN1O95631 604 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 PCGF2P35227 344 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 XCR1P46094 333 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 RAB5CP51148 216 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 PPIAP62937 165 aaKnown RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 ARHGAP1Q07960 439 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 NFATC4Q14934 902 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 PRAMEF17Q5VTA0 474 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 DHRS7BQ6IAN0 325 aaPredicted RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 JMJD6Q6NYC1 403 aaPredicted RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 OR6V1Q8N148 313 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 CSGALNACT1Q8TDX6 532 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 THAP3Q8WTV1 239 aaPredicted RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 RGP1Q92546 391 aaPredicted RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 PPCDCQ96CD2 204 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 ECHDC3Q96DC8 303 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 CPEB1Q9BZB8 566 aaKnown RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 PLA2G12AQ9BZM1 189 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 LAT2Q9GZY6 243 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 FN3KRPQ9HA64 309 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 TMEM30AQ9NV96 361 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 TMEM45AQ9NWC5 275 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 FAM170BA6NMN3 283 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 FGF10O15520 208 aaPredicted RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 GCM2O75603 506 aaPredicted RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 SLC2A10O95528 541 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 FGF9P31371 208 aaPredicted RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 PTGER1P34995 402 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 BMI1P35226 326 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 SLC6A11P48066 632 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 PODNL1Q6PEZ8 512 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 GDPD4Q6W3E5 623 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 ABHD13Q7L211 337 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 KCTD9Q7L273 389 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 LRP11Q86VZ4 500 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 ACBD6Q9BR61 282 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 TRPV4Q9HBA0 871 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 FAM212BQ9NTI7 297 aaPredicted RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 ZNF223Q9UK11 482 aaPredicted RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 MOKQ9UQ07 419 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 HS3ST4Q9Y661 456 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 SCN4AP35499 1836 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 MEIS3P2A8K0S8 358 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 H7C0S8 307 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 GALR3O60755 368 aaPredicted RBP11.39□□□□□ -0.59
MATR3-227ENST00000618441 SCAPQ12770 1279 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 BATFQ16520 125 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 ACSM3Q53FZ2 586 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 TMEM69Q5SWH9 247 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 TCEAL6Q6IPX3 200 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 TAPT1Q6NXT6 567 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 COMTD1Q86VU5 262 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 MISPQ8IVT2 679 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 FAM219AQ8IW50 185 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 ARRDC1Q8N5I2 433 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 OR2AK2Q8NG84 335 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 OR1J4Q8NGS1 313 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 PRR7Q8TB68 274 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 LKAAEAR1Q8TD35 194 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 MRPL38Q96DV4 380 aaKnown RBP11.39□□□□□ -0.59
MATR3-227ENST00000618441 WDR13Q9H1Z4 485 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 TCF7L1Q9HCS4 588 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 CRTAC1Q9NQ79 661 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 FAM120CQ9NX05 1096 aaKnown RBP11.39□□□□□ -0.59
MATR3-227ENST00000618441 URGCP-MRPS24S4R325 110 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 RANBP2P49792 3224 aaKnown RBP11.39□□□□□ -0.59
MATR3-227ENST00000618441 A0A1B0GUH1 482 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 A0A1W2PPE2 198 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 FLRT2O43155 660 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 HYAL3O43820 417 aaPredicted RBP11.39□□□□□ -0.59
MATR3-227ENST00000618441 IFNA2P01563 188 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 SPI1P17947 270 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 DGKAP23743 735 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 AVPR2P30518 371 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 S100A7P31151 101 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 MRPL19P49406 292 aaKnown RBP11.39□□□□□ -0.59
MATR3-227ENST00000618441 FLT3LGP49771 235 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 CDH4P55283 916 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 RAB40BQ12829 278 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 ZBTB6Q15916 424 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 PYY3Q5JQD4 70 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 OR10K2Q6IF99 312 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 PAQR9Q6ZVX9 377 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 FCRLAQ7L513 359 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 ZNF596Q8TC21 504 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 PHOSPHO2Q8TCD6 241 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 OTUB2Q96DC9 234 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 AKR1E2Q96JD6 320 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 DERL3Q96Q80 235 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 PARD6GQ9BYG4 376 aaPredicted RBP11.39□□□□□ -0.59
MATR3-227ENST00000618441 AP4M1O00189 453 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 SEMG1P04279 462 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 MUC1P15941 1255 aaPredicted RBP11.39□□□□□ -0.59
MATR3-227ENST00000618441 RAB6AP20340 208 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 ELAVL4P26378 380 aaKnown RBP11.39□□□□□ -0.59
MATR3-227ENST00000618441 DDTP30046 118 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 RFX3P48380 749 aa11.39□□□□□ -0.59
MATR3-227ENST00000618441 ZNF140P52738 457 aaPredicted RBP11.39□□□□□ -0.59
MATR3-227ENST00000618441 ZNF155Q12901 538 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms