RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-225	ENST00000617087	KLHL41	O60662	606 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	SLITRK3	O94933	977 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	GAPDH	P04406	335 aa	Known RBP	4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	CRYGB	P07316	175 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	GATA1	P15976	413 aa	Predicted RBP	4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	VDAC1	P21796	283 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	FAS	P25445	335 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	CASP14	P31944	242 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	DDOST	P39656	456 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	MDH2	P40926	338 aa	Known RBP	4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	PRRX1	P54821	245 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	CHRNB3	Q05901	458 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	SLC10A7	Q0GE19	358 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	DUSP7	Q16829	419 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	OR2B11	Q5JQS5	317 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	PRAMEF20	Q5VT98	475 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	DNM1P46	Q6ZS02	220 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	CADM2	Q8N3J6	435 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	CXorf40B	Q96DE9	158 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	NUS1	Q96E22	293 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	VSIG2	Q96IQ7	327 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	SERAC1	Q96JX3	654 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	FMO2	Q99518	471 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	C19orf24	Q9BVV8	132 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	NMRAL1	Q9HBL8	299 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	BFAR	Q9NZS9	450 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	SLC7A8	Q9UHI5	535 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	COPS3	Q9UNS2	423 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	CSAG2	Q9Y5P2	127 aa		4.19	□□□□□ -1.74
PVT1-225	ENST00000617087	BAZ1B	Q9UIG0	1483 aa	Known RBP	4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	IGLV8-61	A0A075B6I0	122 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	SMIM28	A0A1B0GU29	152 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087		A0A1W2PPV9	198 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087		A0A1W2PQ72	361 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	TCRBV9S1A1T	A0A576	114 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	CST1	P01037	141 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	ZP3	P21754	424 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	CD1C	P29017	333 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	ATP5O	P48047	213 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	PLK1	P53350	603 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	ENPEP	Q07075	957 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	ASPH	Q12797	758 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	MRPL28	Q13084	256 aa	Known RBP	4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	RCN1	Q15293	331 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	ZNF77	Q15935	545 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	AANAT	Q16613	207 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	BCL7A	Q4VC05	210 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	CARD16	Q5EG05	197 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	SKA3	Q8IX90	412 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	SDR9C7	Q8NEX9	313 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	OR1L6	Q8NGR2	347 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	RAPGEF5	Q92565	580 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	SEC22A	Q96IW7	307 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	KCNA7	Q96RP8	456 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	KLHDC3	Q9BQ90	382 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	NT5M	Q9NPB1	228 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	ABCG2	Q9UNQ0	655 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	PEX16	Q9Y5Y5	336 aa		4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	COL5A2	P05997	1499 aa	Predicted RBP	4.18	□□□□□ -1.74
PVT1-225	ENST00000617087	NES	P48681	1621 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	IQANK1	A0A1B0GTG1	560 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087		A8MXQ7	604 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	GFY	I3L273	518 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	DCTN6	O00399	190 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	HSD17B6	O14756	317 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	WBP4	O75554	376 aa	Known RBP	4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	AGT	P01019	485 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	PABPC4L	P0CB38	370 aa	Known RBP	4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	NPR2	P20594	1047 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	GATA2	P23769	480 aa	Predicted RBP	4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	GDF1	P27539	372 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	CALCR	P30988	508 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	CCDC173	Q0VFZ6	552 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	OXA1L	Q15070	435 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	LPAL2	Q16609	132 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	LRRC36	Q1X8D7	754 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	C15orf32	Q32M92	178 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	TCTEX1D4	Q5JR98	221 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	ATAD3C	Q5T2N8	411 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	GPRC6A	Q5T6X5	926 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	OR2G6	Q5TZ20	316 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	RNASEK	Q6P5S7	137 aa	Known RBP	4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	PAMR1	Q6UXH9	720 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	ACOT7L	Q6ZUV0	252 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	GTSCR1	Q86UQ5	136 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	NRM	Q8IXM6	262 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	KLHL30-AS1	Q8NEE0	82 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	SPATA4	Q8NEY3	305 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	OR13F1	Q8NGS4	319 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	ZPLD1	Q8TCW7	415 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	SETD7	Q8WTS6	366 aa	Known RBP	4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	UFD1	Q92890	307 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	OXGR1	Q96P68	337 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	SIGLEC12	Q96PQ1	595 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	CNN2	Q99439	309 aa	Known RBP	4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	PAXX	Q9BUH6	204 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	NMUR2	Q9GZQ4	415 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	KLHL28	Q9NXS3	571 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms