RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 CKAP2Q8WWK9 683 aa19■□□□□ 0.63
PPP4R1-228ENST00000584074 DDIT4LQ96D03 193 aa19■□□□□ 0.63
PPP4R1-228ENST00000584074 THOC1Q96FV9 657 aaKnown RBP19■□□□□ 0.63
PPP4R1-228ENST00000584074 A4GALTQ9NPC4 353 aa19■□□□□ 0.63
PPP4R1-228ENST00000584074 EMC3Q9P0I2 261 aa19■□□□□ 0.63
PPP4R1-228ENST00000584074 TRAPPC4Q9Y296 219 aa19■□□□□ 0.63
PPP4R1-228ENST00000584074 MED13LQ71F56 2210 aa19■□□□□ 0.63
PPP4R1-228ENST00000584074 ZNF208O43345 1280 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 DNPH1O43598 174 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 LYZL6O75951 148 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 THBS1P07996 1170 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 IMPDH2P12268 514 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 BMP2P12643 396 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 FPR1P21462 350 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 HOXC12P31275 282 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 H3F3AP84243 136 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 FADDQ13158 208 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 TAB1Q15750 504 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 AGKQ53H12 422 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 LRIF1Q5T3J3 769 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 RNF220Q5VTB9 566 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 ZNF704Q6ZNC4 412 aaPredicted RBP18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 BHLHA15Q7RTS1 189 aaPredicted RBP18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 CADM2Q8N3J6 435 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 MAGEB18Q96M61 343 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 RAD21L1Q9H4I0 556 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 ZNF232Q9UNY5 417 aa18.99■□□□□ 0.63
PPP4R1-228ENST00000584074 MTORP42345 2549 aa18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 CXCR1P25024 350 aa18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 NTF4P34130 210 aa18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 NR1H2P55055 460 aa18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 NKX6-1P78426 367 aaPredicted RBP18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 KRTAP1-3Q8IUG1 177 aa18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 C10orf111Q8N326 155 aa18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 PIGXQ8TBF5 258 aa18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 HSD17B8Q92506 261 aa18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 PIGTQ969N2 578 aa18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 CCL19Q99731 98 aa18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 SPATA9Q9BWV2 254 aa18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 CACYBPQ9HB71 228 aaKnown RBP18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 BCL2L10Q9HD36 194 aa18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 VAPAQ9P0L0 249 aa18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 NOSIPQ9Y314 301 aaKnown RBP18.98■□□□□ 0.63
PPP4R1-228ENST00000584074 SASH3O75995 380 aa18.97■□□□□ 0.63
PPP4R1-228ENST00000584074 IGHV3-9P01782 118 aa18.97■□□□□ 0.63
PPP4R1-228ENST00000584074 ATP4BP51164 291 aa18.97■□□□□ 0.63
PPP4R1-228ENST00000584074 MAP2K6P52564 334 aa18.97■□□□□ 0.63
PPP4R1-228ENST00000584074 SLC16A1P53985 500 aa18.97■□□□□ 0.63
PPP4R1-228ENST00000584074 SLC35A1P78382 337 aa18.97■□□□□ 0.63
PPP4R1-228ENST00000584074 SQLEQ14534 574 aa18.97■□□□□ 0.63
PPP4R1-228ENST00000584074 ZNF311Q5JNZ3 666 aa18.97■□□□□ 0.63
PPP4R1-228ENST00000584074 WBP2NLQ6ICG8 309 aa18.97■□□□□ 0.63
PPP4R1-228ENST00000584074 C20orf204Q6ZNR8 217 aa18.97■□□□□ 0.63
PPP4R1-228ENST00000584074 SERPINA11Q86U17 422 aa18.97■□□□□ 0.63
PPP4R1-228ENST00000584074 PIP5K1AQ99755 562 aa18.97■□□□□ 0.63
PPP4R1-228ENST00000584074 TMEM204Q9BSN7 226 aa18.97■□□□□ 0.63
PPP4R1-228ENST00000584074 IFT52Q9Y366 437 aa18.97■□□□□ 0.63
PPP4R1-228ENST00000584074 C5orf58C9J3I9 102 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 FRS3O43559 492 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 EIF1BO60739 113 aaKnown RBP18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 SMPD2O60906 423 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 PGM3O95394 542 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 NCF2P19878 526 aaPredicted RBP18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 IGHV1-2P23083 117 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 ADSLP30566 484 aaPredicted RBP18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 COPZ1P61923 177 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 BNIP2Q12982 314 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 CAPRIN1Q14444 709 aaKnown RBP18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 ZSWIM7Q19AV6 140 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 PRAMEF8Q5VWM4 474 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 PRAMEF7Q5VXH5 474 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 ATG4DQ86TL0 474 aaPredicted RBP18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 UBE2J2Q8N2K1 259 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 BBS10Q8TAM1 723 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 APH1AQ96BI3 265 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 RSPO3Q9BXY4 272 aaPredicted RBP18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 POTEKPQ9BYX7 375 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 IKZF5Q9H5V7 419 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 ARMC7Q9H6L4 198 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 TMEM45AQ9NWC5 275 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 DCTN4Q9UJW0 460 aa18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 SETD2Q9BYW2 2564 aaPredicted RBP18.96■□□□□ 0.63
PPP4R1-228ENST00000584074 TRBV5-3A0A0A0MS03 114 aa18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 GPR171O14626 319 aa18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 CNOT4O95628 575 aaKnown RBP18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 COX5AP20674 150 aa18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 IDUAP35475 653 aa18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 RIPPLY3P57055 190 aa18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 HOXC5Q00444 222 aa18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 CEACAM7Q14002 265 aa18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 STK11Q15831 433 aa18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 GCNT6Q5T4J0 391 aa18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 FBXW9Q5XUX1 488 aa18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 SEZ6L2Q6UXD5 910 aa18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 NFKBIDQ8NI38 313 aa18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 USB1Q9BQ65 265 aaKnown RBP18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 NAA11Q9BSU3 229 aaPredicted RBP18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 DLL4Q9NR61 685 aa18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 PRDM4Q9UKN5 801 aa18.95■□□□□ 0.62
PPP4R1-228ENST00000584074 A0A1W2PP18 115 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms