RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 COPS3Q9UNS2 423 aa2.64□□□□□ -1.99
PPP4R1-227ENST00000583988 ASF1AQ9Y294 204 aa2.64□□□□□ -1.99
PPP4R1-227ENST00000583988 TTC21BQ7Z4L5 1316 aa2.64□□□□□ -1.99
PPP4R1-227ENST00000583988 PTCH1Q13635 1447 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 IGHV3OR16-13A0A075B7E8 117 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 A0A0G2JRQ6 117 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 A0A1B0GUA9 196 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 A8MUA0 341 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 IDSB3KWA1 339 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 KIF2AO00139 706 aaPredicted RBP2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 ARPC3O15145 178 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 AP2A1O95782 977 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 LGI1O95970 557 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 RPS2P15880 293 aaKnown RBP2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 HNF1AP20823 631 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 MDKP21741 143 aaPredicted RBP2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 COX7A1P24310 79 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 HTR1EP28566 365 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 LAP3P28838 519 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 GRIA1P42261 906 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 KPNA2P52292 529 aaKnown RBP2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 MAP2K1Q02750 393 aaPredicted RBP2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 CUL1Q13616 776 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 MPPED2Q15777 294 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 LRRC23Q53EV4 343 aaPredicted RBP2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 TP53I3Q53FA7 332 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 DNAJC21Q5F1R6 531 aaKnown RBP2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 CFAP157Q5JU67 520 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 TPGS2Q68CL5 300 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 Q6ZVH6 145 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 PPP1R42Q7Z4L9 355 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 SLC38A6Q8IZM9 456 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 FTMTQ8N4E7 242 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 DCAF4L2Q8NA75 395 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 CATSPER1Q8NEC5 780 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 OR2T3Q8NH03 318 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 RSPH1Q8WYR4 309 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 EDEM2Q9BV94 578 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 SUDS3Q9H7L9 328 aaPredicted RBP2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 PLGRKTQ9HBL7 147 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 MMP26Q9NRE1 261 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 UFSP2Q9NUQ7 469 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 AATFQ9NY61 560 aaKnown RBP eCLIP2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 CGNQ9P2M7 1197 aaKnown RBP2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 KIF25Q9UIL4 384 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 V9GY05 133 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 NOTCH2Q04721 2471 aa2.63□□□□□ -1.99
PPP4R1-227ENST00000583988 IGHV1OR21-1A0A087WYE8 117 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 LRP5LA4QPB2 252 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 USP27XA6NNY8 438 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 PANO1I0J062 215 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 DCTN6O00399 190 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 ZNF861PO60384 105 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 SPAG6O75602 509 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 UGT2B4P06133 528 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 PAX7P23759 505 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 ZNF133P52736 654 aaPredicted RBP2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 EFNB2P52799 333 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 CRYBB1P53674 252 aaPredicted RBP2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 CKAP4Q07065 602 aaKnown RBP2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 C1orf61Q13536 156 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 NSDHLQ15738 373 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 EXOC3L2Q2M3D2 409 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 NSUN5P1Q3KNT7 163 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 PARP15Q460N3 678 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 ATP6V0D2Q8N8Y2 350 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 OR10G3Q8NGC4 313 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 FBXO30Q8TB52 745 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 PIGCQ92535 297 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 RAPGEF5Q92565 580 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 TM4SF19Q96DZ7 209 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 ZNF799Q96GE5 643 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 PAGE5Q96GU1 130 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 COQ2Q96H96 371 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 HES7Q9BYE0 225 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 PARD6BQ9BYG5 372 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 POPDC2Q9HBU9 364 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 SMOXQ9NWM0 555 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 TREM2Q9NZC2 230 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 POLDIP2Q9Y2S7 368 aa2.62□□□□□ -1.99
PPP4R1-227ENST00000583988 A0A1B0GUS0 222 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 CCDC182A6NF36 153 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 KRTAP4-16G5E9R7 235 aaPredicted RBP2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 GFYI3L273 518 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 PRRG1O14668 218 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 PRKAB2O43741 272 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 GMFGO60234 142 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 UGT1A9O60656 530 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 PFKFB2O60825 505 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 DBTP11182 482 aaKnown RBP2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 CMA1P23946 247 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 CCNE1P24864 410 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 RPL13AP40429 203 aaKnown RBP2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 GLP1RP43220 463 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 CSNK1DP48730 415 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 HLCSP50747 726 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 RPS14P62263 151 aaKnown RBP2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 DAZ2Q13117 558 aaKnown RBP2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 PDK3Q15120 406 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 MICBQ29980 383 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms