RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 FAM153CQ494X1 144 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 ATP6AP1LQ52LC2 224 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 C12orf54Q6X4T0 127 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 CCDC103Q8IW40 242 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 ANKS4BQ8N8V4 417 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 FAM71CQ8NEG0 241 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 COQ8BQ96D53 544 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 DNAJA3Q96EY1 480 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 NAA11Q9BSU3 229 aaPredicted RBP10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 OR11A1Q9GZK7 315 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 BPESC1Q9GZL8 116 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 ZNF350Q9GZX5 532 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 OBP2BQ9NPH6 170 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 SLC7A10Q9NS82 523 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 CA10Q9NS85 328 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 KCNE5Q9UJ90 142 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 PCDHGB4Q9UN71 923 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 CENPVL1A0A0U1RR11 272 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 B9A039 149 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 TRIM13O60858 407 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 PEX11AO75192 247 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 PDE5AO76074 875 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 SNUPNO95149 360 aaKnown RBP10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 AGR2O95994 175 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 CRYAAP02489 173 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 FGF4P08620 206 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 PAX7P23759 505 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 RYKP34925 604 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 PGM1P36871 562 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 HTR3AP46098 478 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 CHN2P52757 468 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 HBA1P69905 142 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 SLC35A1P78382 337 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 ATAD3BQ5T9A4 648 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 TSPO2Q5TGU0 170 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 SPATA19Q7Z5L4 167 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 ABHD12BQ7Z5M8 362 aaPredicted RBP10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 C10orf107Q8IVU9 208 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 POMGNT2Q8NAT1 580 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 HPS1Q92902 700 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 DDIT4LQ96D03 193 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 SLC35G5Q96KT7 338 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 DUSP26Q9BV47 211 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 KATNB1Q9BVA0 655 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 GATA5Q9BWX5 397 aaPredicted RBP10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 RAB1BQ9H0U4 201 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 TMEFF2Q9UIK5 374 aaPredicted RBP10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 FLVCR1Q9Y5Y0 555 aa10.16□□□□□ -0.78
CTDNEP1-212ENST00000576613 TENM1Q9UKZ4 2725 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 RNF103-CHMP3A0A140T963 221 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 TMEM233B4DJY2 109 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 KRT33AO76009 404 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 GUSBP08236 651 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 ITGA2P17301 1181 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 CDH2P19022 906 aaPredicted RBP10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 PCMT1P22061 227 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 GIFP27352 417 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 PPOXP50336 477 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 SLC17A1Q14916 467 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 PCLAFQ15004 111 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 EFNB3Q15768 340 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 HIKESHIQ53FT3 197 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 XKR7Q5GH72 579 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 EMBQ6PCB8 327 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 UGT2A3Q6UWM9 527 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 C6orf120Q7Z4R8 191 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 ADGRG3Q86Y34 549 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 IFT20Q8IY31 132 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 ARFGAP2Q8N6H7 521 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 KRTCAP2Q8N6L1 136 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 FNDC5Q8NAU1 212 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 PMM1Q92871 262 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 TMEM45BQ96B21 275 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 SLC38A2Q96QD8 506 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 C1orf50Q9BV19 199 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 ADAM19Q9H013 955 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 SERHL2Q9H4I8 314 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 MOV10Q9HCE1 1003 aaKnown RBP10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 EXOSC3Q9NQT5 275 aaKnown RBP10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 POLE3Q9NRF9 147 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 GIMAP2Q9UG22 337 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 WDR45Q9Y484 360 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 PCDHB14Q9Y5E9 798 aa10.15□□□□□ -0.78
CTDNEP1-212ENST00000576613 NUP214P35658 2090 aaPredicted RBP10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 TMED7-TICAM2A0A0A6YYA0 188 aa10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 IGHV1-18A0A0C4DH31 117 aa10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 LRP5LA4QPB2 252 aa10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 KLF11O14901 512 aa10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 ZNF208O43345 1280 aa10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 SPRY1O43609 319 aaPredicted RBP10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 NPHS1O60500 1241 aa10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 CHRNGP07510 517 aa10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 OR4A8P0C604 315 aa10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 DAOP14920 347 aa10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 KRT4P19013 534 aa10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 CCNA2P20248 432 aa10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 APEX1P27695 318 aaKnown RBP10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 SLC1A3P43003 542 aa10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 IDH2P48735 452 aaKnown RBP10.14□□□□□ -0.79
CTDNEP1-212ENST00000576613 IDH3GP51553 393 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms