RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 RAC3P60763 192 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 NKX6-1P78426 367 aaPredicted RBP6.56□□□□□ -1.36
ZEB1-223ENST00000561304 RASGEF1BQ0VAM2 473 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 ACKR1Q16570 336 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 PDCD4Q53EL6 469 aaKnown RBP6.56□□□□□ -1.36
ZEB1-223ENST00000561304 SYT14P1Q58G82 188 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 RPS26P11Q5JNZ5 115 aaPredicted RBP6.56□□□□□ -1.36
ZEB1-223ENST00000561304 Q5PR19 223 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 TMEM201Q5SNT2 666 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 ATAD3BQ5T9A4 648 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 NXNQ6DKJ4 435 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 ZNF704Q6ZNC4 412 aaPredicted RBP6.56□□□□□ -1.36
ZEB1-223ENST00000561304 ZNF621Q6ZSS3 439 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 SPATA19Q7Z5L4 167 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 ADGRG3Q86Y34 549 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 KIRREL3Q8IZU9 778 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 CIARTQ8N365 385 aaPredicted RBP6.56□□□□□ -1.36
ZEB1-223ENST00000561304 LILRB1Q8NHL6 650 aaPredicted RBP6.56□□□□□ -1.36
ZEB1-223ENST00000561304 NEUROG1Q92886 237 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 VPS33AQ96AX1 596 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 CCL19Q99731 98 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 TMEM204Q9BSN7 226 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 MANSC1Q9H8J5 431 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 POLE3Q9NRF9 147 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 SLC35A3Q9Y2D2 325 aa6.56□□□□□ -1.36
ZEB1-223ENST00000561304 PLCE1Q9P212 2302 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 DNHD1Q96M86 4753 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 LOC100289279A0A1B0GTE1 492 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 TMEM72A0PK05 275 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 ZC3H12DA2A288 527 aaKnown RBP6.55□□□□□ -1.36
ZEB1-223ENST00000561304 AGAP5A6NIR3 686 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 TRPC5OSA6NMA1 111 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 ZNF716A6NP11 495 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 LYZL6O75951 148 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 PRKD3O94806 890 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 AGR2O95994 175 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 YES1P07947 543 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 PABPC4LP0CB38 370 aaKnown RBP6.55□□□□□ -1.36
ZEB1-223ENST00000561304 ETFAP13804 333 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 PPP3CBP16298 524 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 HOXB9P17482 250 aaPredicted RBP6.55□□□□□ -1.36
ZEB1-223ENST00000561304 CCNA2P20248 432 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 IGHV1-2P23083 117 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 OR3A2P47893 321 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 KCNJ10P78508 379 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 TAB1Q15750 504 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 TTMPQ5BVD1 217 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 BEX5Q5H9J7 111 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 SFRP5Q5T4F7 317 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 MRPL2Q5T653 305 aaKnown RBP6.55□□□□□ -1.36
ZEB1-223ENST00000561304 GTF2IRD2BQ6EKJ0 949 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 TMPPEQ6ZT21 453 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 Q71RC1 249 aaPredicted RBP6.55□□□□□ -1.36
ZEB1-223ENST00000561304 CROCCP2Q86T23 111 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 GTF2IRD2Q86UP8 949 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 STK32CQ86UX6 486 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 VRK2Q86Y07 508 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 CCDC103Q8IW40 242 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 C10orf111Q8N326 155 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 VPS37AQ8NEZ2 397 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 ZNF563Q8TA94 476 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 PIWIL2Q8TC59 973 aaKnown RBP6.55□□□□□ -1.36
ZEB1-223ENST00000561304 WDR60Q8WVS4 1066 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 TMEM234Q8WY98 164 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 UTP4Q969X6 686 aaKnown RBP6.55□□□□□ -1.36
ZEB1-223ENST00000561304 PERPQ96FX8 193 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 REXO5Q96IC2 774 aaKnown RBP6.55□□□□□ -1.36
ZEB1-223ENST00000561304 TRNT1Q96Q11 434 aaKnown RBP6.55□□□□□ -1.36
ZEB1-223ENST00000561304 PIP5K1AQ99755 562 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 RSPO3Q9BXY4 272 aaPredicted RBP6.55□□□□□ -1.36
ZEB1-223ENST00000561304 GP6Q9HCN6 339 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 SLCO1B3Q9NPD5 702 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 TIGARQ9NQ88 270 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 EXOSC3Q9NQT5 275 aaKnown RBP6.55□□□□□ -1.36
ZEB1-223ENST00000561304 SDR39U1Q9NRG7 319 aaPredicted RBP6.55□□□□□ -1.36
ZEB1-223ENST00000561304 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.55□□□□□ -1.36
ZEB1-223ENST00000561304 RLIMQ9NVW2 624 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 NPAP1Q9NZP6 1156 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 KLHL9Q9P2J3 617 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 CHRNA9Q9UGM1 479 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 EDARQ9UNE0 448 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 HIF3AQ9Y2N7 669 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 GPR52Q9Y2T5 361 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 CHST2Q9Y4C5 530 aa6.55□□□□□ -1.36
ZEB1-223ENST00000561304 DSPPQ9NZW4 1301 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 ARFGEF3Q5TH69 2177 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 IGKV3D-15A0A087WSY6 115 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 TMED7-TICAM2A0A0A6YYA0 188 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 TRIM64A6NGJ6 449 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 TRIM64BA6NI03 449 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 ZNF724A8MTY0 619 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 SULT2B1O00204 365 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 RFXANKO14593 260 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 KLF11O14901 512 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 GSC2O15499 205 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 SMPD2O60906 423 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 SLC22A3O75751 556 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 PMS2P2O95744 297 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 IGHV3-9P01782 118 aa6.54□□□□□ -1.36
ZEB1-223ENST00000561304 GKN3PP0CG01 181 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms