RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 ACTL6AO96019 429 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 THRBP10828 461 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 PEPDP12955 493 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 ZNF708P17019 499 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 BMP7P18075 431 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 RHCEP18577 417 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 SLC7A1P30825 629 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 RRM2P31350 389 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 APOBEC1P41238 236 aaKnown RBP6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 HTR3AP46098 478 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 LIMS1P48059 325 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 UGT2B15P54855 530 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 TPD52P55327 224 aaPredicted RBP6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 CLDN15P56746 228 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 CLDN18P56856 261 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 CLDN20P56880 219 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 TAS2R41P59536 307 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 COPZ1P61923 177 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 SPIBQ01892 262 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 EGR4Q05215 589 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 CHRNB3Q05901 458 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 SLC10A1Q14973 349 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 C3AR1Q16581 482 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 SYT14P1Q58G82 188 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 VASNQ6EMK4 673 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 ULK3Q6PHR2 472 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 POMZP3Q6PJE2 187 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 LINC00114Q6XXX2 140 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 ZNF771Q7L3S4 317 aaPredicted RBP6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 ADGRG3Q86Y34 549 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 NKAIN4Q8IVV8 208 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 GHDCQ8N2G8 530 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 ZNF843Q8N446 348 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 PIK3C3Q8NEB9 887 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 TMEM255BQ8WV15 326 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 DNAJA4Q8WW22 397 aaPredicted RBP6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 PYDC1Q8WXC3 89 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 SLC38A4Q969I6 547 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 ADGRG7Q96K78 797 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 PIP5K1AQ99755 562 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 PTDSS2Q9BVG9 487 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 CHID1Q9BWS9 393 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 PRDM14Q9GZV8 571 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 TMEM185BQ9H7F4 350 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 TMEM27Q9HBJ8 222 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 AGPAT4Q9NRZ5 378 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 ARMC1Q9NVT9 282 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 RHCGQ9UBD6 479 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 RPS6KB2Q9UBS0 482 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 CHRNA9Q9UGM1 479 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 RIMS3Q9UJD0 308 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 RALYQ9UKM9 306 aaKnown RBP6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 PRDM4Q9UKN5 801 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 AURKCQ9UQB9 309 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 TMED7Q9Y3B3 224 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 ZNF337Q9Y3M9 751 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 TESMINQ9Y4I5 508 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 RELNP78509 3460 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 MPDZO75970 2070 aa6.33□□□□□ -1.4
CTDSPL2-210ENST00000560834 CACNA1BQ00975 2339 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 A0A1W2PRQ8 180 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 OR14I1A6ND48 311 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 ELOA3DA6NLF2 546 aaPredicted RBP6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 LINC01387J3KSC0 135 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 ZNF208O43345 1280 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 PIP5K1CO60331 668 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 TIPRLO75663 272 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 KRT36O76013 467 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 H1F0P07305 194 aaKnown RBP6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 PNMTP11086 282 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 ITGA2P17301 1181 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 HOXB6P17509 224 aaKnown RBP6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 CCNA2P20248 432 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 POU3F2P20265 443 aaPredicted RBP6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 SFTPDP35247 375 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 STARP49675 285 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 SUCLG1P53597 346 aaKnown RBP6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 RAC1P63000 192 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 ST3GAL3Q11203 375 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 DGCR6Q14129 220 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 SEC23BQ15437 767 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 ELOA3BQ3SY89 546 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 EMC4Q5J8M3 183 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 HMBOX1Q6NT76 420 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 ARHGAP11AQ6P4F7 1023 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 AAGABQ6PD74 315 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 CYP4Z1Q86W10 505 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 ELOA3Q8NG57 546 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 OR4C15Q8NGM1 316 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 PFN4Q8NHR9 129 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 SLC25A43Q8WUT9 341 aaPredicted RBP6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 SMPDL3BQ92485 455 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 ABTB1Q969K4 478 aaPredicted RBP6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 MIB2Q96AX9 1013 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 WDYHV1Q96HA8 205 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 MPP4Q96JB8 637 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 ARL5BQ96KC2 179 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 KLHL15Q96M94 604 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 ZNF347Q96SE7 839 aa6.32□□□□□ -1.4
CTDSPL2-210ENST00000560834 TIMP4Q99727 224 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms