RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 LILRA1O75019 489 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 RGS9O75916 674 aaPredicted RBP8.65□□□□□ -1.02
TPM1-225ENST00000560679 KRT6AP02538 564 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 KRT6BP04259 564 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 TACSTD2P09758 323 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 BMP4P12644 408 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 SLC7A1P30825 629 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 GSTM5P46439 218 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 KRT6CP48668 564 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 MNAT1P51948 309 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 CDH15P55291 814 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 CLCQ05315 142 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 BTKQ06187 659 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 HSPB3Q12988 150 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 SLC9B1Q4ZJI4 515 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 DEF8Q6ZN54 512 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 GALNT5Q7Z7M9 940 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 LSRQ86X29 649 aaPredicted RBP8.65□□□□□ -1.02
TPM1-225ENST00000560679 ZNF100Q8IYN0 542 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 KIRREL3Q8IZU9 778 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 CDRT4Q8N9R6 151 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 LINC01356Q8N9X3 169 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 GPR119Q8TDV5 335 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 MUS81Q96NY9 551 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 ZNF382Q96SR6 550 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 OCEL1Q9H607 264 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 METTL17Q9H7H0 456 aaPredicted RBP8.65□□□□□ -1.02
TPM1-225ENST00000560679 MYOZ1Q9NP98 299 aaPredicted RBP8.65□□□□□ -1.02
TPM1-225ENST00000560679 TCF7L2Q9NQB0 619 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 MIEF1Q9NQG6 463 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 UBQLN4Q9NRR5 601 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 SIRT5Q9NXA8 310 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 TAS2R16Q9NYV7 291 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 TAS2R1Q9NYW7 299 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 NPIPA5A0A0B4J1W7 369 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 TRPC5OSA6NMA1 111 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 ZNF716A6NP11 495 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 NPIPA7E9PJI5 369 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 PDLIM1O00151 329 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 SLC22A2O15244 555 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 PEX11AO75192 247 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 ULK1O75385 1050 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 STAMBPO95630 424 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 NPIPA8P0DM63 369 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 PRPS2P11908 318 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 NCF2P19878 526 aaPredicted RBP8.64□□□□□ -1.03
TPM1-225ENST00000560679 GIFP27352 417 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 APEX1P27695 318 aaKnown RBP8.64□□□□□ -1.03
TPM1-225ENST00000560679 PGM1P36871 562 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 P2RX1P51575 399 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 SNRPD2P62316 118 aaKnown RBP8.64□□□□□ -1.03
TPM1-225ENST00000560679 LGALS3BPQ08380 585 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 MLC1Q15049 377 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 TRIP10Q15642 601 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 VPS26BQ4G0F5 336 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 UNC50Q53HI1 259 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 SLC25A53Q5H9E4 307 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 FRMD7Q6ZUT3 714 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 GPRIN3Q6ZVF9 776 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 SLC46A3Q7Z3Q1 461 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 UBE2J2Q8N2K1 259 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 RBM15BQ8NDT2 890 aaKnown RBP8.64□□□□□ -1.03
TPM1-225ENST00000560679 OR52E4Q8NGH9 312 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 PHOSPHO1Q8TCT1 267 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 CIDECQ96AQ7 238 aaPredicted RBP8.64□□□□□ -1.03
TPM1-225ENST00000560679 L3HYPDHQ96EM0 354 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 C16orf58Q96GQ5 468 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 MS4A4EQ96PG1 132 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 OR5B2Q96R09 309 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 OR52B2Q96RD2 323 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 SNX18Q96RF0 628 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 KCNA7Q96RP8 456 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 FKRPQ9H9S5 495 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 ZDHHC2Q9UIJ5 367 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 METRNQ9UJH8 293 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 MOKQ9UQ07 419 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 CARD8Q9Y2G2 431 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 POLR3HQ9Y535 204 aaPredicted RBP8.64□□□□□ -1.03
TPM1-225ENST00000560679 TIMM22Q9Y584 194 aa8.64□□□□□ -1.03
TPM1-225ENST00000560679 E9PBE3 544 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 TMPRSS2O15393 492 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 CIB2O75838 187 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 NUDT14O95848 222 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 HPGDP15428 266 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 PGCP20142 388 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 HMOX2P30519 316 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 LCN1P31025 176 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 CHN2P52757 468 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 PRKAG1P54619 331 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 DVL1P1P54792 670 aaPredicted RBP8.63□□□□□ -1.03
TPM1-225ENST00000560679 SUMO3P55854 103 aaPredicted RBP8.63□□□□□ -1.03
TPM1-225ENST00000560679 MXRA7P84157 204 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 DEFA6Q01524 100 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 KLF10Q13118 480 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 KLHL26Q53HC5 615 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 ZNF385BQ569K4 471 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 ZNF678Q5SXM1 525 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 C9orf135Q5VTT2 229 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 ANKRD26P1Q6NSI1 321 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 C3orf33Q6P1S2 294 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms