RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 TRIM51Q9BSJ1 452 aa5.73□□□□□ -1.49
TDP1-215ENST00000556498 GLIS2Q9BZE0 524 aaPredicted RBP5.73□□□□□ -1.49
TDP1-215ENST00000556498 MS4A7Q9GZW8 240 aaPredicted RBP5.73□□□□□ -1.49
TDP1-215ENST00000556498 NAA50Q9GZZ1 169 aaKnown RBP5.73□□□□□ -1.49
TDP1-215ENST00000556498 OR2AG1Q9H205 316 aa5.73□□□□□ -1.49
TDP1-215ENST00000556498 SLC25A32Q9H2D1 315 aa5.73□□□□□ -1.49
TDP1-215ENST00000556498 SMOC2Q9H3U7 446 aa5.73□□□□□ -1.49
TDP1-215ENST00000556498 TUBA4BQ9H853 241 aa5.73□□□□□ -1.49
TDP1-215ENST00000556498 FKRPQ9H9S5 495 aa5.73□□□□□ -1.49
TDP1-215ENST00000556498 C6orf50Q9HD87 102 aa5.73□□□□□ -1.49
TDP1-215ENST00000556498 LTB4R2Q9NPC1 389 aa5.73□□□□□ -1.49
TDP1-215ENST00000556498 OR2S2Q9NQN1 319 aa5.73□□□□□ -1.49
TDP1-215ENST00000556498 SMCO4Q9NRQ5 59 aa5.73□□□□□ -1.49
TDP1-215ENST00000556498 AGPAT4Q9NRZ5 378 aa5.73□□□□□ -1.49
TDP1-215ENST00000556498 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.73□□□□□ -1.49
TDP1-215ENST00000556498 MRTO4Q9UKD2 239 aaKnown RBP5.73□□□□□ -1.49
TDP1-215ENST00000556498 FLVCR2Q9UPI3 526 aa5.73□□□□□ -1.49
TDP1-215ENST00000556498 TNNQ9UQP3 1299 aa5.73□□□□□ -1.49
TDP1-215ENST00000556498 RBM7Q9Y580 266 aaKnown RBP5.73□□□□□ -1.49
TDP1-215ENST00000556498 PREX1Q8TCU6 1659 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 CEP170BQ9Y4F5 1589 aaPredicted RBP5.72□□□□□ -1.49
TDP1-215ENST00000556498 SETBP1Q9Y6X0 1596 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 CHD2O14647 1828 aaKnown RBP5.72□□□□□ -1.49
TDP1-215ENST00000556498 A0A096LPI6 279 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 TRBV7-9A0A0J9YWB2 115 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 CPED1A4D0V7 1026 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 OR6C68A6NDL8 312 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 CXorf65A6NEN9 183 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 CLDN24A6NM45 220 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 HSPB2A8KAH6 182 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 C9J4A7 227 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 HRKO00198 91 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 TEX33O43247 280 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 ZNF749O43361 778 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 SSNA1O43805 119 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 CDC40O60508 579 aaKnown RBP eCLIP5.72□□□□□ -1.49
TDP1-215ENST00000556498 FZD7O75084 574 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 SLCO2B1O94956 709 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 HPP00738 406 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 HPRP00739 348 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 TCRBP04435 133 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 SERPIND1P05546 499 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 MYF5P13349 255 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 FOLR1P15328 257 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 ZNF14P17017 642 aaPredicted RBP5.72□□□□□ -1.49
TDP1-215ENST00000556498 CEBPBP17676 345 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 SLC6A4P31645 630 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 SSTR5P35346 364 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 CEACAM3P40198 252 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 RPS9P46781 194 aaKnown RBP5.72□□□□□ -1.49
TDP1-215ENST00000556498 TTPAP49638 278 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 STK19P49842 368 aaPredicted RBP5.72□□□□□ -1.49
TDP1-215ENST00000556498 CDKN2DP55273 166 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 BIDP55957 195 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 ST8SIA6P61647 398 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 SNRPD2P62316 118 aaKnown RBP5.72□□□□□ -1.49
TDP1-215ENST00000556498 HERV-K104P63124 156 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 JAG1P78504 1218 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 ADARB1P78563 741 aaKnown RBP5.72□□□□□ -1.49
TDP1-215ENST00000556498 FPGSQ05932 587 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 AESQ08117 197 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 BST1Q10588 318 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 PTP4A2Q12974 167 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 TUSC3Q13454 348 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 RUNX2Q13950 521 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 GK3PQ14409 553 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 FGFBP1Q14512 234 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 HSPB2Q16082 182 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 SGCBQ16585 318 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 POU2AF1Q16633 256 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 PLEKHN1Q494U1 663 aaPredicted RBP5.72□□□□□ -1.49
TDP1-215ENST00000556498 CRY2Q49AN0 593 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 TMEM41BQ5BJD5 291 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 PYY3Q5JQD4 70 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 COL5A1-AS1Q5SY13 56 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 SAMD13Q5VXD3 122 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 NXNL2Q5VZ03 156 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 GLYATQ6IB77 296 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 FSTL4Q6MZW2 842 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 NRARPQ7Z6K4 114 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.72□□□□□ -1.49
TDP1-215ENST00000556498 S100A7AQ86SG5 101 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 LINC01551Q86U37 167 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 ZNF546Q86UE3 836 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 SERPINA9Q86WD7 417 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 CHSY1Q86X52 802 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 ZNF280BQ86YH2 543 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 CRLF3Q8IUI8 442 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 Q8N402 240 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 PARP16Q8N5Y8 322 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 FADS6Q8N9I5 356 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 OR14K1Q8NGZ2 314 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 OR2G2Q8NGZ5 317 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 OR2T11Q8NH01 316 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 NUBPLQ8TB37 319 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 RXFP4Q8TDU9 374 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 SORCS1Q8WY21 1168 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 RORBQ92753 470 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 LIN37Q96GY3 246 aaPredicted RBP5.72□□□□□ -1.49
TDP1-215ENST00000556498 SMIM8Q96KF7 97 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms