RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 GOLGA6L10A0A0M3HER8 536 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 ATP6V1G2-DDX39BF2Z307 99 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 CYTIPO60759 359 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 BCL10O95999 233 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 IGKV1D-16P01601 117 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 IGHV3-9P01782 118 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 MSMBP08118 114 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 NUDT17P0C025 328 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 ELK4P28324 431 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 MPIP34949 423 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 GP5P40197 560 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 MAGEA4P43358 317 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 RFX3P48380 749 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 GALNT1Q10472 559 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-236ENST00000556220 DLG1Q12959 904 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 GTF2H2Q13888 395 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 PPP1R7Q15435 360 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 EFNB3Q15768 340 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 ZKSCAN8Q15776 578 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-236ENST00000556220 GABRA6Q16445 453 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 GTF2H2CQ6P1K8 395 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 FAHD2BQ6P2I3 314 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-236ENST00000556220 CRIP3Q6Q6R5 217 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 GOLGA7Q7Z5G4 137 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 SPATA19Q7Z5L4 167 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 PDIK1LQ8N165 341 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 UBE2J2Q8N2K1 259 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 OR4C3Q8NH37 302 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 DCAKDQ8WVC6 231 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 WDR60Q8WVS4 1066 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 LRRC39Q96DD0 335 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 FAHD2AQ96GK7 314 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 LRRC37BQ96QE4 947 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 ZNF300Q96RE9 604 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-236ENST00000556220 SLC6A7Q99884 636 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 PKP2Q99959 881 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 KLHDC3Q9BQ90 382 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 SLITRK2Q9H156 845 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 COQ10BQ9H8M1 238 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 NTN4Q9HB63 628 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 NMRAL1Q9HBL8 299 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 SLC35C2Q9NQQ7 365 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 TAS2R16Q9NYV7 291 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 FBXO9Q9UK97 447 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-236ENST00000556220 GRID1Q9ULK0 1009 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 C19orf53Q9UNZ5 99 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-236ENST00000556220 MOKQ9UQ07 419 aa5.93□□□□□ -1.46
ATXN3-236ENST00000556220 LOC105371242A0A075B767 164 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 A0A087WV62 115 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 GXYLT2A0PJZ3 443 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 SYCE1LA8MT33 242 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 UPK1AO00322 258 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 PDE5AO76074 875 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 PSMG1O95456 288 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 ESRRBO95718 433 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 OXSR1O95747 527 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-236ENST00000556220 PNPP00491 289 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 ERCC1P07992 297 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-236ENST00000556220 NGFRP08138 427 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 OR4A8P0C604 315 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 GABRA3P34903 492 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 SELENOPP49908 381 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 IL13RA1P78552 427 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 FOXF1Q12946 379 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 PDIA2Q13087 525 aaKnown RBP5.92□□□□□ -1.46
ATXN3-236ENST00000556220 IFT88Q13099 833 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 ZNHIT3Q15649 155 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-236ENST00000556220 ADIPOQQ15848 244 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 PFKFB4Q16877 469 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 C1QTNF12Q5T7M4 302 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 TTC19Q6DKK2 380 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-236ENST00000556220 METTL2BQ6P1Q9 378 aaKnown RBP5.92□□□□□ -1.46
ATXN3-236ENST00000556220 MISPQ8IVT2 679 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 FAM9CQ8IZT9 166 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 GATSQ8NAP1 163 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 ATP6V1C2Q8NEY4 427 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 NUDT10Q8NFP7 164 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 OR51F2Q8NH61 342 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 B4GALNT2Q8NHY0 566 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 ZFP90Q8TF47 636 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 GRK7Q8WTQ7 553 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 ATP6V1E2Q96A05 226 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 EXOSC8Q96B26 276 aaKnown RBP5.92□□□□□ -1.46
ATXN3-236ENST00000556220 NUDT11Q96G61 164 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 SH3YL1Q96HL8 342 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-236ENST00000556220 GPR22Q99680 433 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 LMF2Q9BU23 707 aaKnown RBP5.92□□□□□ -1.46
ATXN3-236ENST00000556220 TMEM109Q9BVC6 243 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 RAB17Q9H0T7 212 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 NOL11Q9H8H0 719 aaKnown RBP5.92□□□□□ -1.46
ATXN3-236ENST00000556220 VIPAS39Q9H9C1 493 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 SEC61A2Q9H9S3 476 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 C3orf14Q9HBI5 128 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 LPAR2Q9HBW0 351 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 SLC17A5Q9NRA2 495 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 CA10Q9NS85 328 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 GIMAP4Q9NUV9 329 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 ASB6Q9NWX5 421 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 SENP1Q9P0U3 644 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 MCM8Q9UJA3 840 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms