RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 DTX2Q86UW9 622 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 CCDC103Q8IW40 242 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 DNAJA3Q96EY1 480 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 TEX37Q96LM6 180 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 OR52E6Q96RD3 313 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 ZBTB18Q99592 522 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 NAA11Q9BSU3 229 aaPredicted RBP16.54■□□□□ 0.24
CPSF2-203ENST00000554290 PARD6BQ9BYG5 372 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 SLC38A1Q9H2H9 487 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 AIG1Q9NVV5 245 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 NPAP1Q9NZP6 1156 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 MALT1Q9UDY8 824 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 TMED7-TICAM2A0A0A6YYA0 188 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 PRAMEF27A3QJZ7 478 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 KIAA1324LA8MWY0 1029 aaPredicted RBP16.53■□□□□ 0.24
CPSF2-203ENST00000554290 ZNF208O43345 1280 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 CD8AP01732 235 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 IGHV4-39P01824 125 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 PGRP06401 933 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 THBS1P07996 1170 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 NR2F1P10589 423 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 IL7RP16871 459 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 PTAFRP25105 342 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 DMTNQ08495 405 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 NRF1Q16656 503 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 CEP85LQ5SZL2 805 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 DEPDC4Q8N2C3 294 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 ANKFN1Q8N957 763 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 OR52N5Q8NH56 324 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 WDR60Q8WVS4 1066 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 POU2F3Q9UKI9 436 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 PRDM4Q9UKN5 801 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 TMED7Q9Y3B3 224 aa16.53■□□□□ 0.24
CPSF2-203ENST00000554290 CSPG4Q6UVK1 2322 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 JMJD1CQ15652 2540 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 TLN2Q9Y4G6 2542 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 TRPC5OSA6NMA1 111 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 FAAHO00519 579 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 SDHDO14521 159 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 AP3D1O14617 1153 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 ADAM11O75078 769 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 CRLF1O75462 422 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 DBIP07108 87 aaKnown RBP16.52■□□□□ 0.24
CPSF2-203ENST00000554290 CHRM4P08173 479 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 ALDOCP09972 364 aaKnown RBP16.52■□□□□ 0.24
CPSF2-203ENST00000554290 TACR3P29371 465 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 SLC1A3P43003 542 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 ZNF83P51522 516 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 H3F3AP84243 136 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 PLAURQ03405 335 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 TNFAIP8L3Q5GJ75 292 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 SLC22A25Q6T423 547 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 ZNF440Q8IYI8 595 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 MAPK1IP1LQ8NDC0 245 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 ADAD1Q96M93 576 aaKnown RBP16.52■□□□□ 0.24
CPSF2-203ENST00000554290 MUS81Q96NY9 551 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 INPP5KQ9BT40 448 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 UPB1Q9UBR1 384 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 OSGIN1Q9UJX0 560 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 SLC9A8Q9Y2E8 581 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 SLC25A15Q9Y619 301 aa16.52■□□□□ 0.24
CPSF2-203ENST00000554290 CFAP73A6NFT4 308 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 HDAC3O15379 428 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 NDUFS7O75251 213 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 KRT75O95678 551 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 GSNP06396 782 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 IL12AP29459 219 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 NTF4P34130 210 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 CDKN2CP42773 168 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 KRTAP1-1Q07627 177 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 GABRA6Q16445 453 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 GSTA3Q16772 222 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 CASP12Q6UXS9 341 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 PEX5LQ8IYB4 626 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 GLB1L3Q8NCI6 653 aaPredicted RBP16.51■□□□□ 0.23
CPSF2-203ENST00000554290 DHRS9Q9BPW9 319 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 RHNO1Q9BSD3 238 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 GDF2Q9UK05 429 aaPredicted RBP16.51■□□□□ 0.23
CPSF2-203ENST00000554290 B3GALT5Q9Y2C3 310 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 GPR45Q9Y5Y3 372 aa16.51■□□□□ 0.23
CPSF2-203ENST00000554290 TMEM72A0PK05 275 aa16.5■□□□□ 0.23
CPSF2-203ENST00000554290 RFXANKO14593 260 aa16.5■□□□□ 0.23
CPSF2-203ENST00000554290 C1QCP02747 245 aa16.5■□□□□ 0.23
CPSF2-203ENST00000554290 RPS4Y1P22090 263 aaKnown RBP16.5■□□□□ 0.23
CPSF2-203ENST00000554290 CD40P25942 277 aa16.5■□□□□ 0.23
CPSF2-203ENST00000554290 TTKP33981 857 aa16.5■□□□□ 0.23
CPSF2-203ENST00000554290 TGFBR3Q03167 851 aa16.5■□□□□ 0.23
CPSF2-203ENST00000554290 C1QTNF12Q5T7M4 302 aa16.5■□□□□ 0.23
CPSF2-203ENST00000554290 DNM1P46Q6ZS02 220 aa16.5■□□□□ 0.23
CPSF2-203ENST00000554290 FBXL14Q8N1E6 418 aa16.5■□□□□ 0.23
CPSF2-203ENST00000554290 ANKRD42Q8N9B4 389 aa16.5■□□□□ 0.23
CPSF2-203ENST00000554290 PNPT1Q8TCS8 783 aaKnown RBP16.5■□□□□ 0.23
CPSF2-203ENST00000554290 WDR55Q9H6Y2 383 aaPredicted RBP16.5■□□□□ 0.23
CPSF2-203ENST00000554290 CBLN4Q9NTU7 201 aa16.5■□□□□ 0.23
CPSF2-203ENST00000554290 THAP1Q9NVV9 213 aa16.5■□□□□ 0.23
CPSF2-203ENST00000554290 DCTN4Q9UJW0 460 aa16.5■□□□□ 0.23
CPSF2-203ENST00000554290 FLVCR1Q9Y5Y0 555 aa16.5■□□□□ 0.23
CPSF2-203ENST00000554290 A0A1W2PR80 420 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 E7EQL1 145 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 SLCO1B7G3V0H7 640 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms