RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 LPCAT2Q7L5N7 544 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 SLC22A16Q86VW1 577 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 LINC01555Q8NAE3 123 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 MINDY2Q8NBR6 621 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 PNPT1Q8TCS8 783 aaKnown RBP2.5□□□□□ -2.01
SCFD1-210ENST00000553693 ZNF606Q8WXB4 792 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 AKR1E2Q96JD6 320 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 SENP8Q96LD8 212 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 TCHPQ9BT92 498 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 DPH7Q9BTV6 452 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 HCAR1Q9BXC0 346 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 NLNQ9BYT8 704 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 POLR1EQ9GZS1 481 aaKnown RBP2.5□□□□□ -2.01
SCFD1-210ENST00000553693 LRRC40Q9H9A6 602 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 EXTL2Q9UBQ6 330 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 KLK12Q9UKR0 248 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 FZR1Q9UM11 496 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 OR10H1Q9Y4A9 318 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 TTC28Q96AY4 2481 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 ARID1AO14497 2285 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 SF3B1O75533 1304 aaKnown RBP eCLIP2.49□□□□□ -2.014e-8■■■■■ 68.9
SCFD1-210ENST00000553693 A0A1B0GUL7 405 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 GSAPA4D1B5 854 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 WASHC1A8K0Z3 465 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 K7EQM0 130 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 CHADO15335 359 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 TPST2O60704 377 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 OR4F21O95013 312 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 NDUFA7O95182 113 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 SNX4O95219 450 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 OAS1P00973 400 aaKnown RBP2.49□□□□□ -2.01
SCFD1-210ENST00000553693 IGHV3-23P01764 117 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 OTX2P32243 289 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 ADRA1AP35348 466 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 PTGFRP43088 359 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 FKBP1AP62942 108 aaKnown RBP2.49□□□□□ -2.01
SCFD1-210ENST00000553693 SPIBQ01892 262 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 EXOSC2Q13868 293 aaKnown RBP2.49□□□□□ -2.01
SCFD1-210ENST00000553693 EIF2B1Q14232 305 aaKnown RBP2.49□□□□□ -2.01
SCFD1-210ENST00000553693 HKDC1Q2TB90 917 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 ADPRMQ3LIE5 342 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 SBK1Q52WX2 424 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 CEP55Q53EZ4 464 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 NIPAL3Q6P499 406 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 ADAMTSL5Q6ZMM2 481 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 TSEN54Q7Z6J9 526 aaKnown RBP2.49□□□□□ -2.01
SCFD1-210ENST00000553693 ERI1Q8IV48 349 aaKnown RBP2.49□□□□□ -2.01
SCFD1-210ENST00000553693 ZDHHC21Q8IVQ6 265 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 EFCAB13Q8IY85 973 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 OR52J3Q8NH60 311 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 RFESDQ8TAC1 157 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 TRMT10AQ8TBZ6 339 aaKnown RBP2.49□□□□□ -2.01
SCFD1-210ENST00000553693 RLN3Q8WXF3 142 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 SDSLQ96GA7 329 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 VSTM2LQ96N03 204 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 ZNF607Q96SK3 696 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 CPXM1Q96SM3 734 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 PLIN2Q99541 437 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 RAB33BQ9H082 229 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 VCX2Q9H322 139 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 EHD1Q9H4M9 534 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 P2RX2Q9UBL9 471 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 RNF14Q9UBS8 474 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 GHRLQ9UBU3 117 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 MIOXQ9UGB7 285 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 FOXJ3Q9UPW0 622 aa2.49□□□□□ -2.01
SCFD1-210ENST00000553693 DLG5Q8TDM6 1919 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 DDX60LQ5H9U9 1706 aaKnown RBP2.48□□□□□ -2.01
SCFD1-210ENST00000553693 BDP1A6H8Y1 2624 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 REV3LO60673 3130 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 A0A0U1RQV5 110 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 TTC26A0AVF1 554 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 CCDC169A6NNP5 214 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 UBXN8O00124 270 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 CLDN5O00501 218 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 JAK2O60674 1132 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 N4BP1O75113 896 aaKnown RBP2.48□□□□□ -2.01
SCFD1-210ENST00000553693 CA11O75493 328 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 SCGNO76038 276 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 IGHDP01880 384 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 IGKV5-2P06315 115 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 CCDC166P0CW27 439 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 HSMCR30P0CW71 290 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 RPS2P15880 293 aaKnown RBP2.48□□□□□ -2.01
SCFD1-210ENST00000553693 CALB2P22676 271 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 IGHV1-2P23083 117 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 SAA4P35542 130 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 OR3A4PP47883 348 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 HTR5AP47898 357 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 HNRNPA3P51991 378 aaKnown RBP2.48□□□□□ -2.01
SCFD1-210ENST00000553693 METAP1P53582 386 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 RAG2P55895 527 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 ATP5IP56385 69 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-210ENST00000553693 CBX1P83916 185 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 ZNF85Q03923 595 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 NCBP1Q09161 790 aaKnown RBP2.48□□□□□ -2.01
SCFD1-210ENST00000553693 PDK3Q15120 406 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 ZIC1Q15915 447 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 PRR4Q16378 134 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 DCAF4L1Q3SXM0 396 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms