RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 ZNF443Q9Y2A4 671 aaPredicted RBP23.4■■□□□ 1.34
SRSF9-202ENST00000546942 NOSIPQ9Y314 301 aaKnown RBP23.4■■□□□ 1.34
SRSF9-202ENST00000546942 NIPBLQ6KC79 2804 aaeCLIP23.39■■□□□ 1.34
SRSF9-202ENST00000546942 CDHR4A6H8M9 788 aa23.39■■□□□ 1.33
SRSF9-202ENST00000546942 CLIC1O00299 241 aa23.39■■□□□ 1.33
SRSF9-202ENST00000546942 NR5A2O00482 541 aa23.39■■□□□ 1.33
SRSF9-202ENST00000546942 RAMP1O60894 148 aa23.39■■□□□ 1.33
SRSF9-202ENST00000546942 NUDT7P0C024 238 aa23.39■■□□□ 1.33
SRSF9-202ENST00000546942 ZNF440Q8IYI8 595 aa23.39■■□□□ 1.33
SRSF9-202ENST00000546942 PIGXQ8TBF5 258 aa23.39■■□□□ 1.33
SRSF9-202ENST00000546942 MAL2Q969L2 176 aa23.39■■□□□ 1.33
SRSF9-202ENST00000546942 PERPQ96FX8 193 aa23.39■■□□□ 1.33
SRSF9-202ENST00000546942 PIP5K1AQ99755 562 aa23.39■■□□□ 1.33
SRSF9-202ENST00000546942 GSX1Q9H4S2 264 aaPredicted RBP23.39■■□□□ 1.33
SRSF9-202ENST00000546942 CACYBPQ9HB71 228 aaKnown RBP23.39■■□□□ 1.33
SRSF9-202ENST00000546942 ZNF232Q9UNY5 417 aa23.39■■□□□ 1.33
SRSF9-202ENST00000546942 DSPPQ9NZW4 1301 aa23.38■■□□□ 1.33
SRSF9-202ENST00000546942 ZC3H12DA2A288 527 aaKnown RBP23.38■■□□□ 1.33
SRSF9-202ENST00000546942 ZNF716A6NP11 495 aa23.38■■□□□ 1.33
SRSF9-202ENST00000546942 CLOCKO15516 846 aa23.38■■□□□ 1.33
SRSF9-202ENST00000546942 ARHGEF9O43307 516 aa23.38■■□□□ 1.33
SRSF9-202ENST00000546942 CXCR1P25024 350 aa23.38■■□□□ 1.33
SRSF9-202ENST00000546942 LARS2Q15031 903 aaKnown RBP23.38■■□□□ 1.33
SRSF9-202ENST00000546942 RGNQ15493 299 aa23.38■■□□□ 1.33
SRSF9-202ENST00000546942 Q5PR19 223 aa23.38■■□□□ 1.33
SRSF9-202ENST00000546942 KRTAP1-3Q8IUG1 177 aa23.38■■□□□ 1.33
SRSF9-202ENST00000546942 FUNDC1Q8IVP5 155 aa23.38■■□□□ 1.33
SRSF9-202ENST00000546942 CLIP4Q8N3C7 705 aa23.38■■□□□ 1.33
SRSF9-202ENST00000546942 NGBQ9NPG2 151 aa23.38■■□□□ 1.33
SRSF9-202ENST00000546942 THUMPD1Q9NXG2 353 aaKnown RBP23.38■■□□□ 1.33
SRSF9-202ENST00000546942 TRAPPC4Q9Y296 219 aa23.38■■□□□ 1.33
SRSF9-202ENST00000546942 IGKV3D-15A0A087WSY6 115 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 A0A0G2JPF8 293 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 HNRNPCL2B2RXH8 293 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 HNRNPCL3B7ZW38 293 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 FAAHO00519 579 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 ZNF208O43345 1280 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 ATP8B1O43520 1251 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 HNRNPCL1O60812 293 aaKnown RBP23.37■■□□□ 1.33
SRSF9-202ENST00000546942 HNRNPCL4P0DMR1 293 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 IMPDH2P12268 514 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 NCF2P19878 526 aaPredicted RBP23.37■■□□□ 1.33
SRSF9-202ENST00000546942 ACAA2P42765 397 aaKnown RBP23.37■■□□□ 1.33
SRSF9-202ENST00000546942 COPZ1P61923 177 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 SLC35A1P78382 337 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 PDK3Q15120 406 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 HSP90B2PQ58FF3 399 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 SHEQ5VZ18 495 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 AKAP1Q92667 903 aaKnown RBP eCLIP23.37■■□□□ 1.33
SRSF9-202ENST00000546942 THOC1Q96FV9 657 aaKnown RBP23.37■■□□□ 1.33
SRSF9-202ENST00000546942 CCDC28BQ9BUN5 200 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 ADAM19Q9H013 955 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 RAD21L1Q9H4I0 556 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 DLL4Q9NR61 685 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 SLAMF8Q9P0V8 285 aa23.37■■□□□ 1.33
SRSF9-202ENST00000546942 A0A096LPI6 279 aa23.36■■□□□ 1.33
SRSF9-202ENST00000546942 PRG2P13727 222 aa23.36■■□□□ 1.33
SRSF9-202ENST00000546942 IGHV1-2P23083 117 aa23.36■■□□□ 1.33
SRSF9-202ENST00000546942 BNIP2Q12982 314 aa23.36■■□□□ 1.33
SRSF9-202ENST00000546942 BLOC1S3Q6QNY0 202 aa23.36■■□□□ 1.33
SRSF9-202ENST00000546942 ATG4DQ86TL0 474 aaPredicted RBP23.36■■□□□ 1.33
SRSF9-202ENST00000546942 STON2Q8WXE9 905 aa23.36■■□□□ 1.33
SRSF9-202ENST00000546942 APH1AQ96BI3 265 aa23.36■■□□□ 1.33
SRSF9-202ENST00000546942 SPDL1Q96EA4 605 aa23.36■■□□□ 1.33
SRSF9-202ENST00000546942 NAA11Q9BSU3 229 aaPredicted RBP23.36■■□□□ 1.33
SRSF9-202ENST00000546942 POTEKPQ9BYX7 375 aa23.36■■□□□ 1.33
SRSF9-202ENST00000546942 ESRP2Q9H6T0 727 aaKnown RBP23.36■■□□□ 1.33
SRSF9-202ENST00000546942 C5orf58C9J3I9 102 aa23.35■■□□□ 1.33
SRSF9-202ENST00000546942 GPR171O14626 319 aa23.35■■□□□ 1.33
SRSF9-202ENST00000546942 HS3ST1O14792 307 aa23.35■■□□□ 1.33
SRSF9-202ENST00000546942 DNPH1O43598 174 aa23.35■■□□□ 1.33
SRSF9-202ENST00000546942 MRPL33O75394 65 aaKnown RBP23.35■■□□□ 1.33
SRSF9-202ENST00000546942 ADSLP30566 484 aaPredicted RBP23.35■■□□□ 1.33
SRSF9-202ENST00000546942 NTF4P34130 210 aa23.35■■□□□ 1.33
SRSF9-202ENST00000546942 MRPL19P49406 292 aaKnown RBP23.35■■□□□ 1.33
SRSF9-202ENST00000546942 IRX1P78414 480 aaPredicted RBP23.35■■□□□ 1.33
SRSF9-202ENST00000546942 AGKQ53H12 422 aa23.35■■□□□ 1.33
SRSF9-202ENST00000546942 ZNF311Q5JNZ3 666 aa23.35■■□□□ 1.33
SRSF9-202ENST00000546942 WBP2NLQ6ICG8 309 aa23.35■■□□□ 1.33
SRSF9-202ENST00000546942 LRRC75A-AS1Q8N1F1 130 aa23.35■■□□□ 1.33
SRSF9-202ENST00000546942 TMEM204Q9BSN7 226 aa23.35■■□□□ 1.33
SRSF9-202ENST00000546942 ARMC7Q9H6L4 198 aa23.35■■□□□ 1.33
SRSF9-202ENST00000546942 MED4Q9NPJ6 270 aa23.35■■□□□ 1.33
SRSF9-202ENST00000546942 SLC25A37Q9NYZ2 338 aa23.35■■□□□ 1.33
SRSF9-202ENST00000546942 RNF115Q9Y4L5 304 aa23.35■■□□□ 1.33
SRSF9-202ENST00000546942 EIF1BO60739 113 aaKnown RBP23.34■■□□□ 1.33
SRSF9-202ENST00000546942 CD3EP07766 207 aa23.34■■□□□ 1.33
SRSF9-202ENST00000546942 THBS1P07996 1170 aa23.34■■□□□ 1.33
SRSF9-202ENST00000546942 FOSL1P15407 271 aa23.34■■□□□ 1.33
SRSF9-202ENST00000546942 GGT1P19440 569 aa23.34■■□□□ 1.33
SRSF9-202ENST00000546942 FADDQ13158 208 aa23.34■■□□□ 1.33
SRSF9-202ENST00000546942 CEACAM7Q14002 265 aa23.34■■□□□ 1.33
SRSF9-202ENST00000546942 PAGE3Q5JUK9 113 aa23.34■■□□□ 1.33
SRSF9-202ENST00000546942 NCMAPQ5T1S8 102 aa23.34■■□□□ 1.33
SRSF9-202ENST00000546942 RNF220Q5VTB9 566 aa23.34■■□□□ 1.33
SRSF9-202ENST00000546942 FBXW9Q5XUX1 488 aa23.34■■□□□ 1.33
SRSF9-202ENST00000546942 SERPINA11Q86U17 422 aa23.34■■□□□ 1.33
SRSF9-202ENST00000546942 TMEM171Q8WVE6 324 aa23.34■■□□□ 1.33
SRSF9-202ENST00000546942 MUCL1Q96DR8 90 aa23.34■■□□□ 1.33
SRSF9-202ENST00000546942 USB1Q9BQ65 265 aaKnown RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms