RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 GXYLT1Q4G148 440 aa21.28■■□□□ 1
SLIT3-204ENST00000518140 POMZP3Q6PJE2 187 aa21.28■■□□□ 1
SLIT3-204ENST00000518140 LINC00299Q6ZSB3 139 aa21.28■■□□□ 1
SLIT3-204ENST00000518140 DEFB124Q8NES8 71 aa21.28■■□□□ 1
SLIT3-204ENST00000518140 SGTBQ96EQ0 304 aa21.28■■□□□ 1
SLIT3-204ENST00000518140 TCFL5Q9UL49 500 aa21.28■■□□□ 1
SLIT3-204ENST00000518140 SDK2Q58EX2 2172 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 CLDN25C9JDP6 229 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 GABARAPO95166 117 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 RCBTB2O95199 551 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 BMP7P18075 431 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 SLC6A8P48029 635 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 STPG1Q5TH74 334 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 FCRLBQ6BAA4 426 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 PLAG1Q6DJT9 500 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 SLC46A3Q7Z3Q1 461 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 SVOPQ8N4V2 548 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 ANKK1Q8NFD2 765 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 BBS1Q8NFJ9 593 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 OR10G3Q8NGC4 313 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 RASL10BQ96S79 203 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 ZNF160Q9HCG1 818 aa21.27■■□□□ 1
SLIT3-204ENST00000518140 CNOT2Q9NZN8 540 aaKnown RBP21.27■■□□□ 1
SLIT3-204ENST00000518140 HCN1O60741 890 aa21.27■□□□□ 0.99
SLIT3-204ENST00000518140 PNMTP11086 282 aa21.27■□□□□ 0.99
SLIT3-204ENST00000518140 IRF3Q14653 427 aa21.27■□□□□ 0.99
SLIT3-204ENST00000518140 PPP1R32Q7Z5V6 425 aa21.27■□□□□ 0.99
SLIT3-204ENST00000518140 GPR119Q8TDV5 335 aa21.27■□□□□ 0.99
SLIT3-204ENST00000518140 IFT27Q9BW83 186 aa21.27■□□□□ 0.99
SLIT3-204ENST00000518140 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.27■□□□□ 0.99
SLIT3-204ENST00000518140 FAM183AA6NL82 134 aa21.26■□□□□ 0.99
SLIT3-204ENST00000518140 CDC40O60508 579 aaKnown RBP eCLIP21.26■□□□□ 0.99
SLIT3-204ENST00000518140 DKK1O94907 266 aa21.26■□□□□ 0.99
SLIT3-204ENST00000518140 PTHP01270 115 aa21.26■□□□□ 0.99
SLIT3-204ENST00000518140 PSMB9P28065 219 aa21.26■□□□□ 0.99
SLIT3-204ENST00000518140 OTX2P32243 289 aa21.26■□□□□ 0.99
SLIT3-204ENST00000518140 P2RX1P51575 399 aa21.26■□□□□ 0.99
SLIT3-204ENST00000518140 GAS1P54826 345 aa21.26■□□□□ 0.99
SLIT3-204ENST00000518140 DOC2BQ14184 412 aa21.26■□□□□ 0.99
SLIT3-204ENST00000518140 COL28A1Q2UY09 1125 aa21.26■□□□□ 0.99
SLIT3-204ENST00000518140 SYT6Q5T7P8 510 aaPredicted RBP21.26■□□□□ 0.99
SLIT3-204ENST00000518140 OR52L1Q8NGH7 329 aa21.26■□□□□ 0.99
SLIT3-204ENST00000518140 TMCO6Q96DC7 493 aa21.26■□□□□ 0.99
SLIT3-204ENST00000518140 DNAJA3Q96EY1 480 aa21.26■□□□□ 0.99
SLIT3-204ENST00000518140 OSGIN1Q9UJX0 560 aa21.26■□□□□ 0.99
SLIT3-204ENST00000518140 RPL36Q9Y3U8 105 aaKnown RBP21.26■□□□□ 0.99
SLIT3-204ENST00000518140 PCDHGA3Q9Y5H0 932 aa21.26■□□□□ 0.99
SLIT3-204ENST00000518140 SLC22A1O15245 554 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 APOL3O95236 402 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 NAGAP17050 411 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 F8A1P23610 371 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 MEDAGQ5VYS4 303 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 LNX2Q8N448 690 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 ZBTB8BQ8NAP8 495 aaPredicted RBP21.25■□□□□ 0.99
SLIT3-204ENST00000518140 KTI12Q96EK9 354 aaPredicted RBP21.25■□□□□ 0.99
SLIT3-204ENST00000518140 MOGAT1Q96PD6 335 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 NPAS1Q99742 590 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 WDR12Q9GZL7 423 aaKnown RBP21.25■□□□□ 0.99
SLIT3-204ENST00000518140 HMG20AQ9NP66 347 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 FARSAQ9Y285 508 aaKnown RBP21.25■□□□□ 0.99
SLIT3-204ENST00000518140 EXPH5Q8NEV8 1989 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 MPDZO75970 2070 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 ITGA10O75578 1167 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 PPP1R3DO95685 299 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 PIPP12273 146 aaPredicted RBP21.25■□□□□ 0.99
SLIT3-204ENST00000518140 IDUAP35475 653 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 LTBQ06643 244 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 QPRTQ15274 297 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 ZNF362Q5T0B9 420 aaPredicted RBP21.25■□□□□ 0.99
SLIT3-204ENST00000518140 AADACL4Q5VUY2 407 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 NDUFAF7Q7L592 441 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 NUP54Q7Z3B4 507 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 RELTQ969Z4 430 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 MED20Q9H944 212 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 HINT3Q9NQE9 182 aaKnown RBP21.25■□□□□ 0.99
SLIT3-204ENST00000518140 CLEC2DQ9UHP7 191 aa21.25■□□□□ 0.99
SLIT3-204ENST00000518140 NSG1A0A0A6YYJ2 146 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 KDM4EB2RXH2 506 aaPredicted RBP21.24■□□□□ 0.99
SLIT3-204ENST00000518140 OR7A10O76100 309 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 HMGN1P05114 100 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 FBXO45P0C2W1 286 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 PGCP20142 388 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 SOX3P41225 446 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 SLC9A3P48764 834 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 FOXK2Q01167 660 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 CBFBQ13951 182 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 EXT1Q16394 746 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 UBE2UQ5VVX9 321 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 C1QL3Q5VWW1 255 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 CPOQ8IVL8 374 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 M1APQ8TC57 530 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 RNF138Q8WVD3 245 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 S100ZQ8WXG8 99 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 YIPF6Q96EC8 236 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 LRFN3Q9BTN0 628 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 TMEM43Q9BTV4 400 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 CDCA4Q9BXL8 241 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 MMP25Q9NPA2 562 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 MED11Q9P086 117 aa21.24■□□□□ 0.99
SLIT3-204ENST00000518140 SPAARA0A1B0GVQ0 90 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms