RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 RPL19P84098 196 aaKnown RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 SHC2P98077 582 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 MC1RQ01726 317 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 MEF2AQ02078 507 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 SCGB2A2Q13296 93 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 SNTB2Q13425 540 aaKnown RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 CDH18Q13634 790 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 HTR4Q13639 388 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 KIAA0141Q14154 515 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 JOSD1Q15040 202 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 PNLIPRP3Q17RR3 467 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZSWIM7Q19AV6 140 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 TMEM241Q24JQ0 296 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 PLK5Q496M5 336 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 COL5A1-AS1Q5SY13 56 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 C9orf135Q5VTT2 229 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 LIPKQ5VXJ0 399 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR52W1Q6IF63 320 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 GRHL2Q6ISB3 625 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 FSTL4Q6MZW2 842 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 FAHD1Q6P587 224 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 NCEH1Q6PIU2 408 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 SCIMPQ6UWF3 145 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF813Q6ZN06 617 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 LINGO2Q7L985 606 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 CUZD1Q86UP6 607 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 UNC93AQ86WB7 457 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 VRK2Q86Y07 508 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 GTPBP8Q8N3Z3 284 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR2M7Q8NG81 312 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR9Q2Q8NGE9 314 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR5L2Q8NGL0 311 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR2V1Q8NHB1 315 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 EXT2Q93063 718 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 RGMAQ96B86 450 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 PHF21BQ96EK2 531 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF419Q96HQ0 510 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 EPYCQ99645 322 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 GPR22Q99680 433 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 CITED2Q99967 270 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 CPPED1Q9BRF8 314 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 VPS25Q9BRG1 176 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 FDXACB1Q9BRP7 624 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 CBWD1Q9BRT8 395 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 SPXQ9BT56 116 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 URM1Q9BTM9 101 aaKnown RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 DDA1Q9BW61 102 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 PLA2G12BQ9BX93 195 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 C1QTNF6Q9BXI9 259 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 AMNQ9BXJ7 453 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 TKTL2Q9H0I9 626 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 RHOJQ9H4E5 214 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 DHX35Q9H5Z1 703 aaKnown RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 SFXN1Q9H9B4 322 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 FKRPQ9H9S5 495 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC52A2Q9HAB3 445 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 PDE7BQ9NP56 450 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 MYNNQ9NPC7 610 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 UBQLN4Q9NRR5 601 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 CYSLTR2Q9NS75 346 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 UQCC1Q9NVA1 299 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 KLHL28Q9NXS3 571 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 HAO2Q9NYQ3 351 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 DHCR7Q9UBM7 475 aaKnown RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 MGAT4CQ9UBM8 478 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF70Q9UC06 446 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 PLEKHB1Q9UF11 243 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 SERGEFQ9UGK8 458 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 KCND3Q9UK17 655 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 PCDHB1Q9Y5F3 818 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 PCDHGA6Q9Y5G7 932 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 PCDHGA5Q9Y5G8 931 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 A0A096LPI6 279 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 TRBV11-1A0A0K0K1C0 115 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 TRDV1A0A1B0GX56 115 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 CPED1A4D0V7 1026 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 CXorf65A6NEN9 183 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 GGT3PA6NGU5 568 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 NKX6-3A6NJ46 265 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 C3orf70A6NLC5 250 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 E9PQ18 207 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 RPL36A-HNRNPH2H7BZ11 118 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 K7ERU9 68 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 CXCR6O00574 342 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 B4GALT5O43286 388 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 COCHO43405 550 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SUV39H1O43463 412 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 MED7O43513 233 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 GSTZ1O43708 216 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC25A17O43808 307 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 AKR7A3O95154 331 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SPDEFO95238 335 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SIX3O95343 332 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SIX6O95475 246 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 HLA-DPB1P04440 258 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 ADRB2P07550 413 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SRPRAP08240 638 aaKnown RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 MELTFP08582 738 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SNRNP70P08621 437 aaKnown RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 MTHFD2P13995 350 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms