RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 SLC6A6P31641 620 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 LCN6P62502 163 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 BICRALQ6AI39 1079 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 RPTNQ6XPR3 784 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 B4GALNT2Q8NHY0 566 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 UFD1Q92890 307 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 KISS1RQ969F8 398 aaPredicted RBP13.6□□□□□ -0.23
PHF3-209ENST00000509330 VMP1Q96GC9 406 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 TEAD3Q99594 435 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 TXNL4BQ9NX01 149 aaKnown RBP13.6□□□□□ -0.23
PHF3-209ENST00000509330 CFL2Q9Y281 166 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 EXOSC1Q9Y3B2 195 aaKnown RBP13.6□□□□□ -0.23
PHF3-209ENST00000509330 MED12Q93074 2177 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 CD8B2A6NJW9 211 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 PSMD9O00233 223 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 CD8BP10966 210 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 CCL4P13236 92 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 ZNF28P17035 718 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 UGT2B10P36537 528 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 TUBA1BP68363 451 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 DNASE1L3Q13609 305 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 FNDC7Q5VTL7 733 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 TUBA1AQ71U36 451 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 PPP1R3BQ86XI6 285 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 CROCCP3Q8IVE0 287 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 CARFQ8N187 725 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 OR4D9Q8NGE8 314 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 TSSK2Q96PF2 358 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 GFM1Q96RP9 751 aaKnown RBP13.59□□□□□ -0.23
PHF3-209ENST00000509330 KATNB1Q9BVA0 655 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 ALG8Q9BVK2 526 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 BARHL1Q9BZE3 327 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 GALNT9Q9HCQ5 603 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 SRPK3Q9UPE1 567 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 CCDC163A0A0D9SF12 145 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 DAPL1A0PJW8 107 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 PFDN1O60925 122 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 NDUFB2O95178 105 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 GTF2E2P29084 291 aaKnown RBP13.59□□□□□ -0.23
PHF3-209ENST00000509330 FBXW4P57775 412 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 FABP5Q01469 135 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 KIF26BQ2KJY2 2108 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 WBP2NLQ6ICG8 309 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 C19orf48Q6RUI8 117 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 LINC00114Q6XXX2 140 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 KLHL36Q8N4N3 616 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 OR6K6Q8NGW6 343 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 DNAJA4Q8WW22 397 aaPredicted RBP13.59□□□□□ -0.23
PHF3-209ENST00000509330 SLC25A36Q96CQ1 311 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 MED17Q9NVC6 651 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 TBX1O43435 398 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 PEPDP12955 493 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 HK1P19367 917 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 GALNSP34059 522 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 RBM34P42696 430 aaKnown RBP13.59□□□□□ -0.23
PHF3-209ENST00000509330 DCDP81605 110 aaKnown RBP13.59□□□□□ -0.23
PHF3-209ENST00000509330 PAPD4Q6PIY7 484 aaKnown RBP13.59□□□□□ -0.23
PHF3-209ENST00000509330 CMIPQ8IY22 773 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 CENPSQ8N2Z9 138 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 DUSP19Q8WTR2 217 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 ARHGAP9Q9BRR9 750 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 GRIP1Q9Y3R0 1128 aa13.59□□□□□ -0.23
PHF3-209ENST00000509330 TMEM129A0AVI4 362 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 NCR1O76036 304 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 CPEP16870 476 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 S100A5P33763 92 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 SDC2P34741 201 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 SOX6P35712 828 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 LIMK1P53667 647 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 RNF4P78317 190 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 EGR4Q05215 589 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 PLEKHG7Q6ZR37 379 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 SSX6Q7RTT6 188 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 ANKRD37Q7Z713 158 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 GID4Q8IVV7 300 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 ATP6V1C2Q8NEY4 427 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 METTL21AQ8WXB1 218 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 DTNBP1Q96EV8 351 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 Q96M85 177 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 NPAS1Q99742 590 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 ZNF649Q9BS31 505 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 CRB3Q9BUF7 120 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 WDR12Q9GZL7 423 aaKnown RBP13.58□□□□□ -0.24
PHF3-209ENST00000509330 NANSQ9NR45 359 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 MRPS18AQ9NVS2 196 aaKnown RBP13.58□□□□□ -0.24
PHF3-209ENST00000509330 GALNT8Q9NY28 637 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 DAPK2Q9UIK4 370 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 SIRT4Q9Y6E7 314 aaPredicted RBP13.58□□□□□ -0.24
PHF3-209ENST00000509330 CACNA1CQ13936 2221 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 TEX13CA0A0J9YWL9 993 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 TRBV11-1A0A0K0K1C0 115 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 E9PI62 339 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 C11orf98E9PRG8 122 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 MASP2O00187 686 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 PLGP00747 810 aaPredicted RBP13.58□□□□□ -0.24
PHF3-209ENST00000509330 EMP2P54851 167 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 LTBQ06643 244 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 ATG4DQ86TL0 474 aaPredicted RBP13.58□□□□□ -0.24
PHF3-209ENST00000509330 ACBD7Q8N6N7 88 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 ASB6Q9NWX5 421 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms