RNA–Protein interactions for RNA: ENST00000492882.1

USP34-220, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 348 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-220ENST00000492882 ZNF385DQ9H6B1 395 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 RANBP3Q9H6Z4 567 aaPredicted RBP0.07□□□□□ -2.4
USP34-220ENST00000492882 TRIM45Q9H8W5 580 aaPredicted RBP0.07□□□□□ -2.4
USP34-220ENST00000492882 IL26Q9NPH9 171 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 GPATCH2LQ9NWQ4 482 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 KLHL28Q9NXS3 571 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 CYP39A1Q9NYL5 469 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 NKIRAS2Q9NYR9 191 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 CGNQ9P2M7 1197 aaKnown RBP0.07□□□□□ -2.4
USP34-220ENST00000492882 CLCF1Q9UBD9 225 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 DHCR7Q9UBM7 475 aaKnown RBP0.07□□□□□ -2.4
USP34-220ENST00000492882 CTSFQ9UBX1 484 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 ATP6V1HQ9UI12 483 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 ZNF639Q9UID6 485 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 DDX19BQ9UMR2 479 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 EIF3LQ9Y262 564 aaKnown RBP0.07□□□□□ -2.4
USP34-220ENST00000492882 HYOU1Q9Y4L1 999 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 AMMECR1Q9Y4X0 333 aaPredicted RBP0.07□□□□□ -2.4
USP34-220ENST00000492882 ASB3Q9Y575 518 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 ASH1LQ9NR48 2969 aaKnown RBP0.07□□□□□ -2.4
USP34-220ENST00000492882 ZBED9Q6R2W3 1325 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 FANCIQ9NVI1 1328 aa0.07□□□□□ -2.4
USP34-220ENST00000492882 RPAP1Q9BWH6 1393 aaPredicted RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 MED13Q9UHV7 2174 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 FAM208BQ5VWN6 2430 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 SDK1Q7Z5N4 2213 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 CCDC88CQ9P219 2028 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 COL6A6A6NMZ7 2263 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 DOCK8Q8NF50 2099 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 BRWD1Q9NSI6 2320 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 MUC21A0A0G2JKD1 596 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 A0A0U1RQG5 324 aaPredicted RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 CENPVL3A0A0U1RRI6 287 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 MUC21A0A140T8X8 626 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 TMEM223A0PJW6 202 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 PRSS37A4D1T9 235 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 ZNF98A6NK75 572 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 E7EQL1 145 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 CCER2I3L3R5 266 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 DYNC1I1O14576 645 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 PSMA7O14818 248 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 SLC31A2O15432 143 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 PSCAO43653 123 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 CDC40O60508 579 aaKnown RBP eCLIP0.06□□□□□ -2.4
USP34-220ENST00000492882 GCM2O75603 506 aaPredicted RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 GLSO94925 669 aaPredicted RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 SIX3O95343 332 aaPredicted RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 ADCY5O95622 1261 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 HLA-DQA1P01909 254 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 ZNF806P0C7X5 589 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 SMIM10L1P0DMW3 83 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 CGB7P0DN87 165 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 CLUP10909 449 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 BCKDHAP12694 445 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 ZNF18P17022 549 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 HOXB8P17481 243 aaPredicted RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 TCP1P17987 556 aaKnown RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 CASTP20810 708 aaKnown RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 TBXA2RP21731 343 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 OMGP23515 440 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 HLA-DMAP28067 261 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 PSMB5P28074 263 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 MARCKSP29966 332 aaPredicted RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 YWHABP31946 246 aaKnown RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 RFC4P35249 363 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 MPV17P39210 176 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 EPS15P42566 896 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 SSR1P43307 286 aaKnown RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 YAP1P46937 504 aaKnown RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 CYB561P49447 251 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 KPNA2P52292 529 aaKnown RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 CASP9P55211 416 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 SSTP61278 116 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 RAP1AP62834 184 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 HERVK_113P63132 956 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 ERVK-8P63133 956 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 KRT83P78385 493 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 EMX1Q04741 257 aaPredicted RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 FUT5Q11128 374 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 MERTKQ12866 999 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 PRDX4Q13162 271 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 SNTB2Q13425 540 aaKnown RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 RIPK1Q13546 671 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 ZNF235Q14590 738 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 PGGHGQ32M88 737 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 FUT11Q495W5 492 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 PYDC2Q56P42 97 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 LRRC10Q5BKY1 277 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 ANKRD20A8PQ5CZ79 823 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 FAM78AQ5JUQ0 283 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 CCDC158Q5M9N0 1113 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 THEM4Q5T1C6 240 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 N4BP2L1Q5TBK1 243 aaPredicted RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 SPATA1Q5VX52 437 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 KCTD11Q693B1 232 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 C11orf71Q6IPW1 123 aa0.06□□□□□ -2.4
USP34-220ENST00000492882 APOBEC3HQ6NTF7 200 aaKnown RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 RPUSD3Q6P087 351 aaKnown RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 CCDC137Q6PK04 289 aaKnown RBP0.06□□□□□ -2.4
USP34-220ENST00000492882 UNQ9165/PRO28630Q6UXU0 137 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms