RNA–Protein interactions for RNA: ENST00000492882.1

USP34-220, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 348 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-220ENST00000492882 AEBP2Q6ZN18 517 aaPredicted RBP25.72■■□□□ 1.71
USP34-220ENST00000492882 CHIC1Q5VXU3 224 aa24.04■■□□□ 1.44
USP34-220ENST00000492882 SENP3Q9H4L4 574 aaPredicted RBP21.98■■□□□ 1.11
USP34-220ENST00000492882 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
USP34-220ENST00000492882 FOXD1Q16676 465 aa20.56■□□□□ 0.88
USP34-220ENST00000492882 POTEDQ86YR6 584 aa19.73■□□□□ 0.75
USP34-220ENST00000492882 MSH5O43196 834 aa19.35■□□□□ 0.69
USP34-220ENST00000492882 PIAS4Q8N2W9 510 aaPredicted RBP19.17■□□□□ 0.66
USP34-220ENST00000492882 PLPPR3Q6T4P5 718 aa19.05■□□□□ 0.64
USP34-220ENST00000492882 PPP6R1Q9UPN7 881 aa18.96■□□□□ 0.63
USP34-220ENST00000492882 ADRA2BP18089 450 aa18.92■□□□□ 0.62
USP34-220ENST00000492882 MAPK8IP2Q13387 824 aaPredicted RBP17.5■□□□□ 0.39
USP34-220ENST00000492882 DMRT2Q9Y5R5 561 aa17.36■□□□□ 0.37
USP34-220ENST00000492882 SCAF1Q9H7N4 1312 aaKnown RBP17.25■□□□□ 0.35
USP34-220ENST00000492882 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
USP34-220ENST00000492882 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
USP34-220ENST00000492882 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
USP34-220ENST00000492882 HOXD11P31277 338 aaPredicted RBP16.54■□□□□ 0.24
USP34-220ENST00000492882 RNF39Q9H2S5 420 aa16.47■□□□□ 0.23
USP34-220ENST00000492882 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
USP34-220ENST00000492882 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
USP34-220ENST00000492882 C1QBPQ07021 282 aaKnown RBP16.2■□□□□ 0.18
USP34-220ENST00000492882 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
USP34-220ENST00000492882 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
USP34-220ENST00000492882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
USP34-220ENST00000492882 NPM3O75607 178 aaKnown RBP15.68■□□□□ 0.1
USP34-220ENST00000492882 U3KPZ7 1027 aaPredicted RBP15.46■□□□□ 0.07
USP34-220ENST00000492882 CAPN15O75808 1086 aa15.43■□□□□ 0.06
USP34-220ENST00000492882 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
USP34-220ENST00000492882 POTEHQ6S545 545 aa15.36■□□□□ 0.05
USP34-220ENST00000492882 DSG3P32926 999 aa15.32■□□□□ 0.04
USP34-220ENST00000492882 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
USP34-220ENST00000492882 KCNA4P22459 653 aa15.09■□□□□ 0.01
USP34-220ENST00000492882 SLC4A2P04920 1241 aa15.07■□□□□ 0
USP34-220ENST00000492882 ABCB7O75027 752 aa15.06■□□□□ 0
USP34-220ENST00000492882 APLP2Q06481 763 aa14.96□□□□□ -0.01
USP34-220ENST00000492882 ZNF219Q9P2Y4 722 aaPredicted RBP14.95□□□□□ -0.02
USP34-220ENST00000492882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.85□□□□□ -0.03
USP34-220ENST00000492882 HNRNPUL2Q1KMD3 747 aaKnown RBP14.85□□□□□ -0.03
USP34-220ENST00000492882 SAMD1Q6SPF0 538 aaPredicted RBP14.76□□□□□ -0.05
USP34-220ENST00000492882 RBM42Q9BTD8 480 aaKnown RBP14.62□□□□□ -0.07
USP34-220ENST00000492882 POLA2Q14181 598 aa14.57□□□□□ -0.08
USP34-220ENST00000492882 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
USP34-220ENST00000492882 CHRDL2Q6WN34 429 aa14.48□□□□□ -0.09
USP34-220ENST00000492882 ATF5Q9Y2D1 282 aaPredicted RBP14.25□□□□□ -0.13
USP34-220ENST00000492882 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
USP34-220ENST00000492882 SLC4A1APQ9BWU0 796 aaKnown RBP14.18□□□□□ -0.14
USP34-220ENST00000492882 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
USP34-220ENST00000492882 ZBTB12Q9Y330 459 aaPredicted RBP14.15□□□□□ -0.14
USP34-220ENST00000492882 SP7Q8TDD2 431 aaPredicted RBP14.13□□□□□ -0.15
USP34-220ENST00000492882 OSCARQ8IYS5 282 aa14.11□□□□□ -0.15
USP34-220ENST00000492882 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
USP34-220ENST00000492882 PIP4P2Q8N4L2 257 aa14.06□□□□□ -0.16
USP34-220ENST00000492882 HAX1O00165 279 aa13.98□□□□□ -0.17
USP34-220ENST00000492882 PITPNM1O00562 1244 aa13.97□□□□□ -0.17
USP34-220ENST00000492882 FXR2P51116 673 aaKnown RBP eCLIP13.87□□□□□ -0.196e-10■■■■■ 28.3
USP34-220ENST00000492882 ZBTB22O15209 634 aa13.84□□□□□ -0.19
USP34-220ENST00000492882 EVX2Q03828 476 aa13.74□□□□□ -0.21
USP34-220ENST00000492882 FBLN2P98095 1184 aa13.72□□□□□ -0.21
USP34-220ENST00000492882 SPDYE2BA6NHP3 402 aa13.69□□□□□ -0.22
USP34-220ENST00000492882 SPDYE6P0CI01 402 aa13.69□□□□□ -0.22
USP34-220ENST00000492882 ATXN8OSP0DMR3 200 aa13.69□□□□□ -0.22
USP34-220ENST00000492882 SPDYE2Q495Y8 402 aa13.69□□□□□ -0.22
USP34-220ENST00000492882 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
USP34-220ENST00000492882 PRKAR2AP13861 404 aaKnown RBP13.64□□□□□ -0.23
USP34-220ENST00000492882 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
USP34-220ENST00000492882 ZNF692Q9BU19 519 aaPredicted RBP13.55□□□□□ -0.24
USP34-220ENST00000492882 MKRN4PQ13434 485 aaPredicted RBP13.53□□□□□ -0.24
USP34-220ENST00000492882 C19orf67A6NJJ6 358 aa13.45□□□□□ -0.26
USP34-220ENST00000492882 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
USP34-220ENST00000492882 SSUH2Q9Y2M2 353 aa13.44□□□□□ -0.26
USP34-220ENST00000492882 GABBR2O75899 941 aa13.39□□□□□ -0.27
USP34-220ENST00000492882 PRR29P0C7W0 189 aa13.35□□□□□ -0.27
USP34-220ENST00000492882 PABPN1Q86U42 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
USP34-220ENST00000492882 LHX8Q68G74 356 aa13.27□□□□□ -0.29
USP34-220ENST00000492882 CD44P16070 742 aaKnown RBP13.18□□□□□ -0.3
USP34-220ENST00000492882 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
USP34-220ENST00000492882 POTEIP0CG38 1075 aa13.08□□□□□ -0.32
USP34-220ENST00000492882 PLSCR2Q9NRY7 297 aa13.04□□□□□ -0.32
USP34-220ENST00000492882 DCBLD2Q96PD2 775 aa13□□□□□ -0.33
USP34-220ENST00000492882 ZRANB1Q9UGI0 708 aa12.96□□□□□ -0.33
USP34-220ENST00000492882 CLCN6P51797 869 aa12.92□□□□□ -0.34
USP34-220ENST00000492882 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
USP34-220ENST00000492882 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
USP34-220ENST00000492882 CSRNP3Q8WYN3 585 aa12.87□□□□□ -0.35
USP34-220ENST00000492882 STAG3Q9UJ98 1225 aa12.83□□□□□ -0.36
USP34-220ENST00000492882 GALR2O43603 387 aaPredicted RBP12.82□□□□□ -0.36
USP34-220ENST00000492882 PAK3O75914 559 aaPredicted RBP12.76□□□□□ -0.37
USP34-220ENST00000492882 SPDYE4A6NLX3 237 aa12.75□□□□□ -0.37
USP34-220ENST00000492882 PHF12Q96QT6 1004 aa12.75□□□□□ -0.37
USP34-220ENST00000492882 OTUD5Q96G74 571 aa12.68□□□□□ -0.38
USP34-220ENST00000492882 POTEB2H3BUK9 544 aa12.67□□□□□ -0.38
USP34-220ENST00000492882 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
USP34-220ENST00000492882 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
USP34-220ENST00000492882 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
USP34-220ENST00000492882 MNX1P50219 401 aaPredicted RBP12.56□□□□□ -0.4
USP34-220ENST00000492882 POTEMA6NI47 508 aa12.53□□□□□ -0.4
USP34-220ENST00000492882 MS4A3Q96HJ5 214 aa12.53□□□□□ -0.4
USP34-220ENST00000492882 METRNQ9UJH8 293 aa12.51□□□□□ -0.41
USP34-220ENST00000492882 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms