RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 HK1P19367 917 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 FUT1P19526 365 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 CSRP1P21291 193 aaKnown RBP6.42□□□□□ -1.38
SF3A3-206ENST00000487062 PCMT1P22061 227 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 TACR3P29371 465 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 RBMS1P29558 406 aaKnown RBP6.42□□□□□ -1.38
SF3A3-206ENST00000487062 DLSTP36957 453 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 POLR2HP52434 150 aaKnown RBP6.42□□□□□ -1.38
SF3A3-206ENST00000487062 NUDT6P53370 316 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 PRPS1P60891 318 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 RPS18P62269 152 aaKnown RBP6.42□□□□□ -1.38
SF3A3-206ENST00000487062 EMX1Q04741 257 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-206ENST00000487062 ST3GAL4Q11206 333 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 CHAF1BQ13112 559 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 PMS2P3Q13401 168 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 SNTA1Q13424 505 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 RAB39AQ14964 217 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 QPRTQ15274 297 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 COL28A1Q2UY09 1125 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 SLC30A6Q6NXT4 461 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 ARHGAP11AQ6P4F7 1023 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 TMEM81Q6P7N7 255 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 CCDC81Q6ZN84 652 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 GRINAQ7Z429 371 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 PPP1R32Q7Z5V6 425 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 RPS19BP1Q86WX3 136 aaKnown RBP6.42□□□□□ -1.38
SF3A3-206ENST00000487062 CLVS1Q8IUQ0 354 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-206ENST00000487062 LNX2Q8N448 690 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 TMEM156Q8N614 296 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 C10orf53Q8N6V4 93 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 OR13C2Q8NGS9 318 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 OR51A7Q8NH64 312 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 ZNF420Q8TAQ5 688 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-206ENST00000487062 GPR119Q8TDV5 335 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 RNF138Q8WVD3 245 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 MUL1Q969V5 352 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 LRR1Q96L50 414 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 IFT27Q9BW83 186 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 KRTAP3-3Q9BYR6 98 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 KRTAP3-2Q9BYR7 98 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 UBQLN3Q9H347 655 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 FN3KQ9H479 309 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 CDCP1Q9H5V8 836 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 AMBNQ9NP70 447 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 FKBP14Q9NWM8 211 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 DNAJC27Q9NZQ0 273 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 FOXJ2Q9P0K8 574 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 RSL24D1Q9UHA3 163 aaKnown RBP6.42□□□□□ -1.38
SF3A3-206ENST00000487062 KLHL21Q9UJP4 597 aa6.42□□□□□ -1.38
SF3A3-206ENST00000487062 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.42□□□□□ -1.38
SF3A3-206ENST00000487062 MPDZO75970 2070 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 TRAV36DV7A0A075B6V5 113 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 TRAV27A0A087WT01 109 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 TMED7-TICAM2A0A0A6YYA0 188 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 SPAARA0A1B0GVQ0 90 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 KDM4EB2RXH2 506 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-206ENST00000487062 PRR23D1E9PI22 279 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-206ENST00000487062 H3BSA7 217 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 BHLHE40O14503 412 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 IDH3BO43837 385 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 GMFGO60234 142 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 ZNF354AO60765 605 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-206ENST00000487062 TRMUO75648 421 aaKnown RBP6.41□□□□□ -1.38
SF3A3-206ENST00000487062 SEC14L2O76054 403 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 FADS2O95864 444 aaKnown RBP6.41□□□□□ -1.38
SF3A3-206ENST00000487062 MT-ATP6P00846 226 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 HIST1H2ABP04908 130 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 CELA2AP08217 269 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 STSP08842 583 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 PRR23D2P0DMB1 279 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-206ENST00000487062 DBTP11182 482 aaKnown RBP6.41□□□□□ -1.38
SF3A3-206ENST00000487062 ZNF3P17036 446 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 PAICSP22234 425 aaKnown RBP6.41□□□□□ -1.38
SF3A3-206ENST00000487062 NOS3P29474 1203 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 SOX3P41225 446 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 APOBEC1P41238 236 aaKnown RBP6.41□□□□□ -1.38
SF3A3-206ENST00000487062 SLC15A1P46059 708 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 ZNF41P51814 821 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-206ENST00000487062 MAP2K6P52564 334 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 GAS1P54826 345 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 CDH11P55287 796 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 SH3BGRP55822 239 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-206ENST00000487062 MLF1P58340 268 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 GABREP78334 506 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 EFNB1P98172 346 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 ZNF91Q05481 1191 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 PIGFQ07326 219 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 TMED1Q13445 227 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 TBCEQ15813 527 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-206ENST00000487062 CNPY1Q3B7I2 92 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 ZNF791Q3KP31 576 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-206ENST00000487062 SYT14P1Q58G82 188 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 ARMC4Q5T2S8 1044 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 FOXB2Q5VYV0 432 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 NXNL2Q5VZ03 156 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 XAF1Q6GPH4 301 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 JMJD6Q6NYC1 403 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-206ENST00000487062 IL20RBQ6UXL0 311 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 HIST3H2AQ7L7L0 130 aa6.41□□□□□ -1.38
SF3A3-206ENST00000487062 CXXC5Q7LFL8 322 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms