RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 LRRC17Q8N6Y2 441 aa12.78□□□□□ -0.36
CLK3-204ENST00000483723 OR52I1Q8NGK6 324 aa12.78□□□□□ -0.36
CLK3-204ENST00000483723 RFKQ969G6 155 aa12.78□□□□□ -0.36
CLK3-204ENST00000483723 NTNG2Q96CW9 530 aa12.78□□□□□ -0.36
CLK3-204ENST00000483723 SPACA9Q96E40 222 aaPredicted RBP12.78□□□□□ -0.36
CLK3-204ENST00000483723 PLEKHA8Q96JA3 519 aa12.78□□□□□ -0.36
CLK3-204ENST00000483723 COG8Q96MW5 612 aa12.78□□□□□ -0.36
CLK3-204ENST00000483723 BCL7BQ9BQE9 202 aa12.78□□□□□ -0.36
CLK3-204ENST00000483723 NCDNQ9UBB6 729 aa12.78□□□□□ -0.36
CLK3-204ENST00000483723 ENPP5Q9UJA9 477 aa12.78□□□□□ -0.36
CLK3-204ENST00000483723 NSG1A0A0A6YYJ2 146 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 ANKUB1A6NFN9 424 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 B4DXG7 233 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 ETV2O00321 342 aaPredicted RBP12.77□□□□□ -0.36
CLK3-204ENST00000483723 TERTO14746 1132 aaKnown RBP12.77□□□□□ -0.36
CLK3-204ENST00000483723 ATE1O95260 518 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 PTHP01270 115 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 CELA2AP08217 269 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 MSX1P28360 303 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 HTR1FP30939 366 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 MLLT10P55197 1068 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 LSAMPQ13449 338 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 STPG1Q5TH74 334 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 TMEM81Q6P7N7 255 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 GRINAQ7Z429 371 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 ADGRG3Q86Y34 549 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 OR5M3Q8NGP4 307 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 LGALS12Q96DT0 336 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 GPX7Q96SL4 187 aaPredicted RBP12.77□□□□□ -0.36
CLK3-204ENST00000483723 IFT27Q9BW83 186 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 TAS2R10Q9NYW0 307 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 FOXJ2Q9P0K8 574 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 CHRNA9Q9UGM1 479 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 EXOGQ9Y2C4 368 aaKnown RBP12.77□□□□□ -0.36
CLK3-204ENST00000483723 HIF3AQ9Y2N7 669 aa12.77□□□□□ -0.36
CLK3-204ENST00000483723 LSM2Q9Y333 95 aaKnown RBP12.77□□□□□ -0.36
CLK3-204ENST00000483723 SDK2Q58EX2 2172 aa12.77□□□□□ -0.37
CLK3-204ENST00000483723 VPS13AQ96RL7 3174 aa12.77□□□□□ -0.37
CLK3-204ENST00000483723 LRRN3E7EW58 273 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 ARPC3O15145 178 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 MAN1A2O60476 641 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 FOXD2O60548 495 aaPredicted RBP12.76□□□□□ -0.37
CLK3-204ENST00000483723 NPIPB7O75200 414 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 ASAH2BP0C7U1 165 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 HK1P19367 917 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 CXCR1P25024 350 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 PSMB9P28065 219 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 TGFBR2P37173 567 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 MTNR1AP48039 350 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 POLR2HP52434 150 aaKnown RBP12.76□□□□□ -0.37
CLK3-204ENST00000483723 TMED1Q13445 227 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 DPY19L2P2Q6ZN68 376 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 CXXC5Q7LFL8 322 aaKnown RBP12.76□□□□□ -0.37
CLK3-204ENST00000483723 ZNF367Q7RTV3 350 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 CPOQ8IVL8 374 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 ESX1Q8N693 406 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 NANOGP1Q8N7R0 232 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 LRRC75AQ8NAA5 344 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 ST8SIA1Q92185 356 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 PTP4A1Q93096 173 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 RNFT2Q96EX2 444 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 CPNE5Q9HCH3 593 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 SDHAF3Q9NRP4 125 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 WARS2Q9UGM6 360 aaKnown RBP12.76□□□□□ -0.37
CLK3-204ENST00000483723 YARS2Q9Y2Z4 477 aaKnown RBP12.76□□□□□ -0.37
CLK3-204ENST00000483723 MPDZO75970 2070 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 ITGA10O75578 1167 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 GABARAPO95166 117 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 WISP1O95388 367 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 PPP1R3DO95685 299 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 RAB36O95755 333 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 HPP00738 406 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 ICAM2P13598 275 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 NBL1P41271 181 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 HTR3AP46098 478 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 CDH11P55287 796 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 PRPS1P60891 318 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 CHAF1BQ13112 559 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 CTF1Q16619 201 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 C3orf38Q5JPI3 329 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 OPN5Q6U736 354 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 GID4Q8IVV7 300 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 PROKR2Q8NFJ6 384 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 OR10G3Q8NGC4 313 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 TMEM234Q8WY98 164 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 KTI12Q96EK9 354 aaPredicted RBP12.76□□□□□ -0.37
CLK3-204ENST00000483723 FRMD6Q96NE9 622 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 MOGAT1Q96PD6 335 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 SECISBP2Q96T21 854 aaKnown RBP12.76□□□□□ -0.37
CLK3-204ENST00000483723 DDOQ99489 341 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 TAPBPLQ9BX59 468 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 GPR87Q9BY21 358 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 NRIP3Q9NQ35 241 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 TAS2R16Q9NYV7 291 aa12.76□□□□□ -0.37
CLK3-204ENST00000483723 TMED7-TICAM2A0A0A6YYA0 188 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 C21orf140B9A014 251 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 IDH3BO43837 385 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 NUDT14O95848 222 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 BGLAPP02818 100 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms