RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ZNF414Q96IQ9 312 aa3.41□□□□□ -1.86
PTCD3-211ENST00000476215 PLEKHF1Q96S99 279 aa3.41□□□□□ -1.86
PTCD3-211ENST00000476215 RNF126Q9BV68 326 aa3.41□□□□□ -1.86
PTCD3-211ENST00000476215 SRXN1Q9BYN0 137 aa3.41□□□□□ -1.86
PTCD3-211ENST00000476215 NXF5Q9H1B4 397 aaKnown RBP3.41□□□□□ -1.86
PTCD3-211ENST00000476215 PALMDQ9NP74 551 aa3.41□□□□□ -1.86
PTCD3-211ENST00000476215 SCML2Q9UQR0 700 aa3.41□□□□□ -1.86
PTCD3-211ENST00000476215 BLMP54132 1417 aaPredicted RBP3.41□□□□□ -1.86
PTCD3-211ENST00000476215 FRMPD4Q14CM0 1322 aa3.41□□□□□ -1.86
PTCD3-211ENST00000476215 EVC2Q86UK5 1308 aa3.41□□□□□ -1.86
PTCD3-211ENST00000476215 RGPD8O14715 1765 aaPredicted RBP3.4□□□□□ -1.86
PTCD3-211ENST00000476215 BRD4O60885 1362 aaPredicted RBP3.4□□□□□ -1.86
PTCD3-211ENST00000476215 TULP4Q9NRJ4 1543 aa3.4□□□□□ -1.86
PTCD3-211ENST00000476215 KIF1AQ12756 1690 aa3.4□□□□□ -1.86
PTCD3-211ENST00000476215 A0A1B0GWB2 263 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 A0A1B0GWJ7 208 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 K7N7A8 449 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 KIF2AO00139 706 aaPredicted RBP3.4□□□□□ -1.87
PTCD3-211ENST00000476215 ZNF264O43296 627 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 UGT2B17O75795 530 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 MMP23AO75900 390 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 TIMP1P01033 207 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 IGLV1-47P01700 117 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 GLI3P10071 1580 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 FUT3P21217 361 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 DRD5P21918 477 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 GABRR1P24046 479 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 AQP1P29972 269 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 CD80P33681 288 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 HPCAL1P37235 193 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 ACAA2P42765 397 aaKnown RBP3.4□□□□□ -1.87
PTCD3-211ENST00000476215 AP3M2P53677 418 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 EOGTQ5NDL2 527 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 KNDC1Q76NI1 1749 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 ARCQ7LC44 396 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 TMEM252Q8N6L7 170 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 STXBP6Q8NFX7 210 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 OSTF1Q92882 214 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 RIT2Q99578 217 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 TMEM117Q9H0C3 514 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 OR51J1Q9H342 316 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 GLIPR2Q9H4G4 154 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 ZNF385DQ9H6B1 395 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 B3GNT2Q9NY97 397 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 TMOD2Q9NZR1 351 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 CHRNA9Q9UGM1 479 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 WARS2Q9UGM6 360 aaKnown RBP3.4□□□□□ -1.87
PTCD3-211ENST00000476215 IFT52Q9Y366 437 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 OR10H1Q9Y4A9 318 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 USP32Q8NFA0 1604 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 TTC21BQ7Z4L5 1316 aa3.4□□□□□ -1.87
PTCD3-211ENST00000476215 CPDO75976 1380 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 PPIP5K1Q6PFW1 1433 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 IGHV2-70DA0A0C4DH43 119 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 G3V4G9 280 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 HCN1O60741 890 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 NOL3O60936 208 aaKnown RBP3.39□□□□□ -1.87
PTCD3-211ENST00000476215 PEX11AO75192 247 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 GNA14O95837 355 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 IGHV3-48P01763 117 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 RNH1P13489 461 aaKnown RBP3.39□□□□□ -1.87
PTCD3-211ENST00000476215 DESP17661 470 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 CYP2B6P20813 491 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 ATP6V1C1P21283 382 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 HPDP32754 393 aaPredicted RBP3.39□□□□□ -1.87
PTCD3-211ENST00000476215 BTDP43251 543 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 CAV2P51636 162 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 WNT4P56705 351 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 GNB2P62879 340 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 CSTF1Q05048 431 aaKnown RBP3.39□□□□□ -1.87
PTCD3-211ENST00000476215 CHRNB3Q05901 458 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 MXD4Q14582 209 aaPredicted RBP3.39□□□□□ -1.87
PTCD3-211ENST00000476215 TATDN3Q17R31 274 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 SLC36A3Q495N2 470 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 ATL3Q6DD88 541 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 WDR74Q6RFH5 385 aaPredicted RBP3.39□□□□□ -1.87
PTCD3-211ENST00000476215 ARMCX2Q7L311 632 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 TPRA1Q86W33 373 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 KIR3DL3Q8N743 410 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 OR2AP1Q8NGE2 309 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 PAQR8Q8TEZ7 354 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 RPL3LQ92901 407 aaKnown RBP3.39□□□□□ -1.87
PTCD3-211ENST00000476215 CYYR1Q96J86 154 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 NAT10Q9H0A0 1025 aaKnown RBP3.39□□□□□ -1.87
PTCD3-211ENST00000476215 RIBC2Q9H4K1 309 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 DCDC2Q9UHG0 476 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 ISY1Q9ULR0 285 aaKnown RBP3.39□□□□□ -1.87
PTCD3-211ENST00000476215 ATP7BP35670 1465 aa3.39□□□□□ -1.87
PTCD3-211ENST00000476215 ADGRB2O60241 1585 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 SSH2Q76I76 1423 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 UTRNP46939 3433 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 A0A1W2PNV4 684 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 PRKYO43930 277 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 BCAS1O75363 584 aaPredicted RBP3.38□□□□□ -1.87
PTCD3-211ENST00000476215 SLITRK3O94933 977 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 LRATO95237 230 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 LALBAP00709 142 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 H2BFMP0C1H6 154 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 HSPA5P11021 654 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms